RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 ACKR3P25106 362 aa11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 EVX1P49640 407 aa11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 CLDN12P56749 244 aa11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 P2RY14Q15391 338 aa11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 CNN3Q15417 329 aaKnown RBP11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 FAM166AQ6J272 317 aa11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 UNQ6126/PRO20091Q6UXV3 157 aa11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 NCCRP1Q6ZVX7 275 aaPredicted RBP11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 RFPL4BQ6ZWI9 263 aa11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 MYPOPQ86VE0 399 aaPredicted RBP11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 FJX1Q86VR8 437 aa11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 PAQR4Q8N4S7 273 aaPredicted RBP11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 OR52N4Q8NGI2 321 aa11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 S100PBPQ96BU1 408 aa11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 MUCL1Q96DR8 90 aa11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 TECTBQ96PL2 329 aa11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 CCDC32Q9BV29 185 aa11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 CYSLTR2Q9NS75 346 aa11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 OR5V1Q9UGF6 321 aa11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 KCNN3Q9UGI6 736 aa11.95□□□□□ -0.5
PDLIM5-203ENST00000359265 MTORP42345 2549 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 ZNF816-ZNF321PA0A0X1KG74 233 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 LOC100289279A0A1B0GTE1 492 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 GGT3PA6NGU5 568 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 SMPD2O60906 423 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 CHRNB4P30926 498 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 ZNF93P35789 620 aaPredicted RBP11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 GK2Q14410 553 aaPredicted RBP11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 C3orf36Q3SXR2 165 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 CLVS2Q5SYC1 327 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 XKRXQ6PP77 449 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 BAIAP2L2Q6UXY1 529 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 ZNF101Q8IZC7 436 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 PNLDC1Q8NA58 520 aaKnown RBP11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 CSNK2A3Q8NEV1 391 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 OR4M1Q8NGD0 313 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 PRR7Q8TB68 274 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 RAB40AQ8WXH6 277 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 SPSB1Q96BD6 273 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 FAM3DQ96BQ1 224 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 CPNE2Q96FN4 548 aaPredicted RBP11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 LRRC46Q96FV0 321 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 REPIN1Q9BWE0 567 aaKnown RBP11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 ACTR6Q9GZN1 396 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 OR10A4Q9H209 315 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 HEATR1Q9H583 2144 aaKnown RBP11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 JKAMPQ9P055 326 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 RABL2AQ9UBK7 228 aaPredicted RBP11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 RABL2BQ9UNT1 228 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 STARD10Q9Y365 291 aa11.94□□□□□ -0.5
PDLIM5-203ENST00000359265 UPK1BO75841 260 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 NRASP01111 189 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 NGFP01138 241 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 CECR9P0C854 216 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 PRKACBP22694 351 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 AZGP1P25311 298 aaKnown RBP11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 POU3F4P49335 361 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 ART1P52961 327 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 PPP1CBP62140 327 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 TNK1Q13470 666 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 RIN1Q13671 783 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 IL18Q14116 193 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 PPA1Q15181 289 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 ZNF79Q15937 498 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 ZNF181Q2M3W8 571 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 TMEM42Q69YG0 159 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 SSX8Q7RTT4 187 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 LYPD6Q86Y78 171 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 LIX1LQ8IVB5 337 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 FTMTQ8N4E7 242 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 OR56B2PQ8NGI1 322 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 SLC25A28Q96A46 364 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 SLC25A38Q96DW6 304 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 GPER1Q99527 375 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 C1QTNF6Q9BXI9 259 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 SRRQ9GZT4 340 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 ABCG5Q9H222 651 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 OR51B6Q9H340 312 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 GPR173Q9NS66 373 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 RHBDL2Q9NX52 303 aa11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 ERRFI1Q9UJM3 462 aaPredicted RBP11.93□□□□□ -0.5
PDLIM5-203ENST00000359265 IGHV1-18A0A0C4DH31 117 aa11.92□□□□□ -0.5
PDLIM5-203ENST00000359265 IGKV1-9A0A0C4DH69 117 aa11.92□□□□□ -0.5
PDLIM5-203ENST00000359265 C16orf97H3BN30 126 aa11.92□□□□□ -0.5
PDLIM5-203ENST00000359265 BPNT1O95861 308 aa11.92□□□□□ -0.5
PDLIM5-203ENST00000359265 FAM157BP0CG42 384 aa11.92□□□□□ -0.5
PDLIM5-203ENST00000359265 ARSBP15848 533 aa11.92□□□□□ -0.5
PDLIM5-203ENST00000359265 TUBG1P23258 451 aa11.92□□□□□ -0.5
PDLIM5-203ENST00000359265 NR4A2P43354 598 aa11.92□□□□□ -0.5
PDLIM5-203ENST00000359265 ASCL1P50553 236 aa11.92□□□□□ -0.5
PDLIM5-203ENST00000359265 PRSS12P56730 875 aa11.92□□□□□ -0.5
PDLIM5-203ENST00000359265 FAM27E3Q08E93 113 aa11.92□□□□□ -0.5
PDLIM5-203ENST00000359265 UBE2V2Q15819 145 aa11.92□□□□□ -0.5
PDLIM5-203ENST00000359265 PYDC2Q56P42 97 aa11.92□□□□□ -0.5
PDLIM5-203ENST00000359265 AWAT2Q6E213 333 aa11.92□□□□□ -0.5
PDLIM5-203ENST00000359265 CMTM4Q8IZR5 234 aa11.92□□□□□ -0.5
PDLIM5-203ENST00000359265 GDPD1Q8N9F7 314 aa11.92□□□□□ -0.5
PDLIM5-203ENST00000359265 OR51D1Q8NGF3 324 aa11.92□□□□□ -0.5
PDLIM5-203ENST00000359265 OR4D6Q8NGJ1 314 aa11.92□□□□□ -0.5
PDLIM5-203ENST00000359265 SYNPRQ8TBG9 265 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms