RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 DBHP09172 617 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 LIPCP11150 499 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 C4BPBP20851 252 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 LHX2P50458 406 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 HABP2Q14520 560 aaPredicted RBP11.12□□□□□ -0.63
GGPS1-202ENST00000358966 ZNF239Q16600 458 aaKnown RBP11.12□□□□□ -0.63
GGPS1-202ENST00000358966 PLA1AQ53H76 456 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 ASB18Q6ZVZ8 466 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 LRRTM1Q86UE6 522 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 MDS2Q8NDY4 140 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 BEST4Q8NFU0 473 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 TSNAXQ99598 290 aaKnown RBP11.12□□□□□ -0.63
GGPS1-202ENST00000358966 SOSTQ9BQB4 213 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 ULBP2Q9BZM5 246 aa11.12□□□□□ -0.63
GGPS1-202ENST00000358966 B4GALT1P15291 398 aa11.11□□□□□ -0.63
GGPS1-202ENST00000358966 SRP9P49458 86 aaKnown RBP11.11□□□□□ -0.63
GGPS1-202ENST00000358966 SPOCK1Q08629 439 aa11.11□□□□□ -0.63
GGPS1-202ENST00000358966 RNF144BQ7Z419 303 aa11.11□□□□□ -0.63
GGPS1-202ENST00000358966 NAA11Q9BSU3 229 aaPredicted RBP11.11□□□□□ -0.63
GGPS1-202ENST00000358966 PNRC2Q9NPJ4 139 aaKnown RBP11.11□□□□□ -0.63
GGPS1-202ENST00000358966 FAM206AQ9NX38 181 aa11.11□□□□□ -0.63
GGPS1-202ENST00000358966 CGGBP1Q9UFW8 167 aaPredicted RBP11.11□□□□□ -0.63
GGPS1-202ENST00000358966 V9GY05 133 aa11.11□□□□□ -0.63
GGPS1-202ENST00000358966 TTRP02766 147 aa11.11□□□□□ -0.63
GGPS1-202ENST00000358966 CD1AP06126 327 aa11.11□□□□□ -0.63
GGPS1-202ENST00000358966 ANXA2P07355 339 aaKnown RBP11.11□□□□□ -0.63
GGPS1-202ENST00000358966 ITGA5P08648 1049 aa11.11□□□□□ -0.63
GGPS1-202ENST00000358966 CLDN18P56856 261 aa11.11□□□□□ -0.63
GGPS1-202ENST00000358966 RAB5BP61020 215 aa11.11□□□□□ -0.63
GGPS1-202ENST00000358966 PPIAP62937 165 aaKnown RBP11.11□□□□□ -0.63
GGPS1-202ENST00000358966 DEFB109BQ30KR1 87 aa11.11□□□□□ -0.63
GGPS1-202ENST00000358966 MAJINQ3KP22 176 aa11.11□□□□□ -0.63
GGPS1-202ENST00000358966 ELP2Q6IA86 826 aa11.11□□□□□ -0.63
GGPS1-202ENST00000358966 COMMD2Q86X83 199 aa11.11□□□□□ -0.63
GGPS1-202ENST00000358966 TGIF2LXQ8IUE1 241 aa11.11□□□□□ -0.63
GGPS1-202ENST00000358966 OR2AJ1Q8NGZ0 328 aa11.11□□□□□ -0.63
GGPS1-202ENST00000358966 SLC25A38Q96DW6 304 aa11.11□□□□□ -0.63
GGPS1-202ENST00000358966 CYSLTR2Q9NS75 346 aa11.11□□□□□ -0.63
GGPS1-202ENST00000358966 FOXD3Q9UJU5 478 aaPredicted RBP11.11□□□□□ -0.63
GGPS1-202ENST00000358966 DHDHQ9UQ10 334 aa11.11□□□□□ -0.63
GGPS1-202ENST00000358966 TRBV5-7A0A0A0MS05 114 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 LOC102725191A0A1B0GVB3 256 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 GJE1A6NN92 205 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 F5H5K5 113 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 EEF1E1O43324 174 aaKnown RBP11.1□□□□□ -0.63
GGPS1-202ENST00000358966 CD3GP09693 182 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 FKBP2P26885 142 aaKnown RBP11.1□□□□□ -0.63
GGPS1-202ENST00000358966 HSD11B1P28845 292 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 FOXG1P55316 489 aaPredicted RBP11.1□□□□□ -0.63
GGPS1-202ENST00000358966 FABP9Q0Z7S8 132 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 LRRC28Q86X40 367 aaPredicted RBP11.1□□□□□ -0.63
GGPS1-202ENST00000358966 MED12LQ86YW9 2145 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 CMTM4Q8IZR5 234 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 OR13C3Q8NGS6 347 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 OR51E1Q8TCB6 317 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 KCNE4Q8WWG9 221 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 NABP1Q96AH0 204 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 SPACA5Q96QH8 159 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 HDHD2Q9H0R4 259 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 AUNIPQ9H7T9 357 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 OR5V1Q9UGF6 321 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 DCDC2BA2VCK2 349 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 DHHO43323 396 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 SSNA1O43805 119 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 NME2P1O60361 137 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 SULT1A3P0DMM9 295 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 SULT1A4P0DMN0 295 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 NME2P22392 152 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 GNG10P50151 68 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 EFNB2P52799 333 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 ZNF121P58317 390 aaPredicted RBP11.1□□□□□ -0.63
GGPS1-202ENST00000358966 ENDOGQ14249 297 aaKnown RBP11.1□□□□□ -0.63
GGPS1-202ENST00000358966 TAF13Q15543 124 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 GUCA2BQ16661 112 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 PRR18Q8N4B5 295 aa11.1□□□□□ -0.63
GGPS1-202ENST00000358966 C7orf50Q9BRJ6 194 aaKnown RBP11.1□□□□□ -0.63
GGPS1-202ENST00000358966 TLX3O43711 291 aaPredicted RBP11.09□□□□□ -0.63
GGPS1-202ENST00000358966 NPR2P20594 1047 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 ZP1P60852 638 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 RAB4BP61018 213 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 DGCR2P98153 550 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 ZNF766Q5HY98 468 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 FDX2Q6P4F2 183 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 AAED1Q7RTV5 226 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 OR51D1Q8NGF3 324 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 FGFBP3Q8TAT2 258 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 DTD1Q8TEA8 209 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 ACOT12Q8WYK0 555 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 TMEM54Q969K7 222 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 CHIAQ9BZP6 476 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 PBOV1Q9GZY1 135 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 TAS2R3Q9NYW6 316 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 B4GALT7Q9UBV7 327 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 ZNF878C9JN71 531 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 VAMP5O95183 116 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 CEACAM1P13688 526 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 SLC6A9P48067 706 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 CLN3Q13286 438 aa11.09□□□□□ -0.63
GGPS1-202ENST00000358966 DHRS7BQ6IAN0 325 aaPredicted RBP11.09□□□□□ -0.63
GGPS1-202ENST00000358966 OR10K2Q6IF99 312 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms