RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 GZMKP49863 264 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 CCR9P51686 369 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 TMEM33P57088 247 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 CSNK2BP67870 215 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 SMN1Q16637 294 aaKnown RBP3.35□□□□□ -1.87
CNOT4-202ENST00000356162 HFEQ30201 348 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 TP53I3Q53FA7 332 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 WDR38Q5JTN6 314 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 C6orf52Q5T4I8 152 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 COMMD2Q86X83 199 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 ZDHHC23Q8IYP9 409 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 C1orf87Q8N0U7 546 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 SEMA6DQ8NFY4 1073 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 OR11L1Q8NGX0 322 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 OR52N1Q8NH53 320 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 OR51E1Q8TCB6 317 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 RORBQ92753 470 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 RAB1CQ92928 201 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 C1orf159Q96HA4 380 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 C4orf36Q96KX1 117 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 MICU1Q9BPX6 476 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 RTL8AQ9BWD3 113 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 PAPOLGQ9BWT3 736 aaKnown RBP3.35□□□□□ -1.87
CNOT4-202ENST00000356162 GPR84Q9NQS5 396 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 TMEM106BQ9NUM4 274 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 FKBP14Q9NWM8 211 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 ENPP5Q9UJA9 477 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 RAB26Q9ULW5 256 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 GTF2A1LQ9UNN4 478 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 CAB39Q9Y376 341 aaPredicted RBP3.35□□□□□ -1.87
CNOT4-202ENST00000356162 DCHS2Q6V1P9 2916 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 ARID1AO14497 2285 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 IGHV4-61A0A0C4DH41 118 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 A0A1B0GTI1 187 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 LOC107986453A0A1B0GWG9 222 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 OR5B21A6NL26 309 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 ANXA2P2A6NMY6 339 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 F5H5P2 479 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 LYNX1G3V0Z9 82 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 H0YL77 283 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 P2RY10O00398 339 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 SMAD7O15105 426 aaKnown RBP3.35□□□□□ -1.87
CNOT4-202ENST00000356162 MAGEB4O15481 346 aaPredicted RBP3.35□□□□□ -1.87
CNOT4-202ENST00000356162 PPIHO43447 177 aaKnown RBP3.35□□□□□ -1.87
CNOT4-202ENST00000356162 CD5LO43866 347 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 FSTL3O95633 263 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 IGHV2-70P01814 119 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 HEXAP06865 529 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 GNAO1P09471 354 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 LYNX1P0DP58 116 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 CA6P23280 308 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 CPT2P23786 658 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 COL8A2P25067 703 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 ACKR3P25106 362 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 GBX2P52951 348 aaPredicted RBP3.35□□□□□ -1.87
CNOT4-202ENST00000356162 OR12D2P58182 307 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 RIPPLY1Q0D2K3 151 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 PRDX4Q13162 271 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 IKZF1Q13422 519 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 ALKBH1Q13686 389 aaKnown RBP3.35□□□□□ -1.87
CNOT4-202ENST00000356162 TMEM155Q4W5P6 130 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 TMEM244Q5VVB8 128 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 LAIR2Q6ISS4 152 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 TMPRSS11AQ6ZMR5 421 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 LHFPL2Q6ZUX7 228 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 PEG10Q86TG7 708 aaKnown RBP3.35□□□□□ -1.87
CNOT4-202ENST00000356162 KLHL36Q8N4N3 616 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 OR14K1Q8NGZ2 314 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 OR2G2Q8NGZ5 317 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 OR8S1Q8NH09 359 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 RPS4Y2Q8TD47 263 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 C10orf35Q96D05 121 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 RAB39BQ96DA2 213 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 PELI1Q96FA3 418 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 TMEM80Q96HE8 168 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 FAM71F1Q96KD3 344 aaPredicted RBP3.35□□□□□ -1.87
CNOT4-202ENST00000356162 TECTBQ96PL2 329 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 ZNF649Q9BS31 505 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 TLNRD1Q9H1K6 362 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 Q9H521 79 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 FN3KRPQ9HA64 309 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 CHCHD3Q9NX63 227 aaKnown RBP3.35□□□□□ -1.87
CNOT4-202ENST00000356162 PSORS1C1Q9UIG5 152 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 MYRFQ9Y2G1 1151 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 WIPI2Q9Y4P8 454 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 NPTNQ9Y639 398 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 ITPR2Q14571 2701 aa3.35□□□□□ -1.87
CNOT4-202ENST00000356162 SETXQ7Z333 2677 aaKnown RBP3.34□□□□□ -1.87
CNOT4-202ENST00000356162 DYSFO75923 2080 aa3.34□□□□□ -1.87
CNOT4-202ENST00000356162 SPG11Q96JI7 2443 aa3.34□□□□□ -1.87
CNOT4-202ENST00000356162 LRRC30A6NM36 301 aa3.34□□□□□ -1.87
CNOT4-202ENST00000356162 TMEM212A6NML5 194 aa3.34□□□□□ -1.87
CNOT4-202ENST00000356162 F5H0A9 414 aaPredicted RBP3.34□□□□□ -1.87
CNOT4-202ENST00000356162 TMEM178BH3BS89 294 aa3.34□□□□□ -1.87
CNOT4-202ENST00000356162 J3QLW9 94 aa3.34□□□□□ -1.87
CNOT4-202ENST00000356162 SLC1A7O00341 560 aa3.34□□□□□ -1.87
CNOT4-202ENST00000356162 SYT7O43581 403 aa3.34□□□□□ -1.87
CNOT4-202ENST00000356162 CDC14BO60729 498 aa3.34□□□□□ -1.87
CNOT4-202ENST00000356162 GATBO75879 557 aaKnown RBP3.34□□□□□ -1.87
CNOT4-202ENST00000356162 ISG15P05161 165 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms