RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 FKBP11Q9NYL4 201 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 LRP12Q9Y561 859 aa11.45□□□□□ -0.58
SYNCRIP-201ENST00000355238 RRP8O43159 456 aaKnown RBP11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 ZNF749O43361 778 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 ZNF207O43670 478 aaKnown RBP11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 ZFPL1O95159 310 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 ACAA1P09110 424 aaPredicted RBP11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 ZNF121P58317 390 aaPredicted RBP11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 TMEM65Q6PI78 240 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 RDH5Q92781 318 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 FGF13Q92913 245 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 GALR2O43603 387 aaPredicted RBP11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 CD1CP29017 333 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 GJA4P35212 333 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 SLC37A1P57057 533 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 TMEM33P57088 247 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 TMEM97Q5BJF2 176 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 TSEN54Q7Z6J9 526 aaKnown RBP11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 DHCR7Q9UBM7 475 aaKnown RBP11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 IGLV3-27P01718 113 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 CRHP06850 196 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 ZNF345Q14585 488 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 RPEL1Q2QD12 228 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 BSXQ3C1V8 233 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 OR2B11Q5JQS5 317 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 OR10G3Q8NGC4 313 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 CA5BP1Q8WTZ4 195 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 NRSN2Q9GZP1 204 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 ING1Q9UK53 422 aaPredicted RBP11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 ONECUT2O95948 504 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 TUSC1Q2TAM9 212 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 FFAR4Q5NUL3 377 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 VWA1Q6PCB0 445 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 BTNL3Q6UXE8 466 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 LILRB1Q8NHL6 650 aaPredicted RBP11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 CNRIP1Q96F85 164 aaPredicted RBP11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 C4orf45Q96LM5 186 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 A0A087WUJ7 227 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 CLEC3BP05452 202 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 KIAA0040Q15053 153 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 OR8B8Q15620 311 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 WDR38Q5JTN6 314 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 MYPOPQ86VE0 399 aaPredicted RBP11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 HMGCLL1Q8TB92 370 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 EXTL1Q92935 676 aa11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 ZNF107Q9UII5 783 aaPredicted RBP11.44□□□□□ -0.58
SYNCRIP-201ENST00000355238 A0A0A6YYD5 115 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 TERTO14746 1132 aaKnown RBP11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 GLRA1P23415 457 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 FUT6P51993 359 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 MRPL43Q8N983 215 aaKnown RBP11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 BHLHE23Q8NDY6 225 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 NAA60Q9H7X0 242 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 M0R1X1 148 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 TNFRSF10CO14798 259 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 HRASP01112 189 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 KRASP01116 189 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 ABOP16442 354 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 CRISP2P16562 243 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 ZNF687Q8N1G0 1237 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 UBR2Q8IWV8 1755 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 A0A1B0GX78 115 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 C7orf66A4D0T2 115 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 AMTP48728 403 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 CLDN15P56746 228 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 FZD2Q14332 565 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 OR8G1Q15617 311 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 ZNF79Q15937 498 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 FAM78BQ5VT40 261 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 BATF2Q8N1L9 274 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 RAB24Q969Q5 203 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 SPSB1Q96BD6 273 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 SNX22Q96L94 193 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 PARP11Q9NR21 331 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 ALOX12BO75342 701 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 SPCS3P61009 180 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 SP6Q3SY56 376 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 LRP11Q86VZ4 500 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 CA13Q8N1Q1 262 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 NEIL1Q96FI4 390 aaPredicted RBP11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 LSM2Q9Y333 95 aaKnown RBP11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 OR5H15A6NDH6 313 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 OR5H1A6NKK0 313 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 COX7A2P2O60397 106 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 SCGB1C2P0DMR2 95 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 P2RY1P47900 373 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 ELOBQ15370 118 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 C8orf82Q6P1X6 216 aaPredicted RBP11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 EDARADDQ8WWZ3 215 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 MARVELD3Q96A59 401 aa11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 UTP23Q9BRU9 249 aaKnown RBP11.43□□□□□ -0.58
SYNCRIP-201ENST00000355238 A0A0B4J2E0 115 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 A0A1B0GTQ1 180 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 A0A1B0GX12 115 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 SIRPB1O00241 398 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 IGF2P01344 180 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 CYC1P08574 325 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 GLB1P16278 677 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 TMEM11P17152 192 aa11.42□□□□□ -0.58
SYNCRIP-201ENST00000355238 FUT3P21217 361 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms