RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 MRPS16Q9Y3D3 137 aaKnown RBP7.3□□□□□ -1.24
SCN8A-201ENST00000354534 WSB1Q9Y6I7 421 aa7.3□□□□□ -1.24
SCN8A-201ENST00000354534 M0R296 226 aa7.3□□□□□ -1.24
SCN8A-201ENST00000354534 KCNJ10P78508 379 aa7.3□□□□□ -1.24
SCN8A-201ENST00000354534 C17orf67Q0P5P2 114 aa7.3□□□□□ -1.24
SCN8A-201ENST00000354534 IL4P05112 153 aa7.3□□□□□ -1.24
SCN8A-201ENST00000354534 CCL11P51671 97 aa7.3□□□□□ -1.24
SCN8A-201ENST00000354534 LBX1P52954 281 aa7.3□□□□□ -1.24
SCN8A-201ENST00000354534 SOX4Q06945 474 aaPredicted RBP7.3□□□□□ -1.24
SCN8A-201ENST00000354534 SAPCD1Q5SSQ6 148 aa7.3□□□□□ -1.24
SCN8A-201ENST00000354534 CLEC14AQ86T13 490 aa7.3□□□□□ -1.24
SCN8A-201ENST00000354534 CPPED1Q9BRF8 314 aaPredicted RBP7.3□□□□□ -1.24
SCN8A-201ENST00000354534 SLC46A2Q9BY10 475 aa7.3□□□□□ -1.24
SCN8A-201ENST00000354534 ST8SIA5O15466 376 aa7.3□□□□□ -1.24
SCN8A-201ENST00000354534 GALR3O60755 368 aaPredicted RBP7.3□□□□□ -1.24
SCN8A-201ENST00000354534 CLEC2LP0C7M8 214 aa7.3□□□□□ -1.24
SCN8A-201ENST00000354534 CIRBPQ14011 172 aaKnown RBP7.3□□□□□ -1.24
SCN8A-201ENST00000354534 HERPUD1Q15011 391 aa7.3□□□□□ -1.24
SCN8A-201ENST00000354534 LYG2Q86SG7 212 aa7.3□□□□□ -1.24
SCN8A-201ENST00000354534 WFIKKN1Q96NZ8 548 aa7.3□□□□□ -1.24
SCN8A-201ENST00000354534 TIMP4Q99727 224 aa7.3□□□□□ -1.24
SCN8A-201ENST00000354534 AJAP1Q9UKB5 411 aaPredicted RBP7.3□□□□□ -1.24
SCN8A-201ENST00000354534 JUNBP17275 347 aaPredicted RBP7.29□□□□□ -1.24
SCN8A-201ENST00000354534 TPBGQ13641 420 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 ZNF683Q8IZ20 524 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 C11orf40Q8WZ69 217 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 HGDQ93099 445 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 HSD3B7Q9H2F3 369 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 XRN1Q8IZH2 1706 aaKnown RBP7.29□□□□□ -1.24
SCN8A-201ENST00000354534 VAMP5O95183 116 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 SLC35E2P0CK97 266 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 PRSS56P0CW18 603 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 CDX1P47902 265 aaPredicted RBP7.29□□□□□ -1.24
SCN8A-201ENST00000354534 FOXA1P55317 472 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 MYBPHQ13203 477 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 SYPL1Q16563 259 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 ZNF788Q6ZQV5 615 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 DUSP18Q8NEJ0 188 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 OR2T10Q8NGZ9 312 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 SPPL3Q8TCT6 385 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 FLYWCH2Q96CP2 140 aaKnown RBP7.29□□□□□ -1.24
SCN8A-201ENST00000354534 ICAM2P13598 275 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 SNRPGP62308 76 aaKnown RBP7.29□□□□□ -1.24
SCN8A-201ENST00000354534 SEMA3BQ13214 749 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 RNFT1Q5M7Z0 435 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 OR13C6PQ8NH95 151 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 SLC17A9Q9BYT1 436 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 RNF39Q9H2S5 420 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 Q9Y3F1 56 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 C5orf49A4QMS7 147 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 ACTL6AO96019 429 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 CCL5P13501 91 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 CD96P40200 585 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 CLPPQ16740 277 aaPredicted RBP7.29□□□□□ -1.24
SCN8A-201ENST00000354534 PRTGQ2VWP7 1150 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 SPINK9Q5DT21 86 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 ASCL4Q6XD76 172 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 UBALD2Q8IYN6 164 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 GALNT16Q8N428 558 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 ADAMTS17Q8TE56 1095 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 DOCK8Q8NF50 2099 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 GPANK1O95872 356 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 ZBTB37Q5TC79 503 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 DPY19L2P2Q6ZN68 376 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 NEURL2Q9BR09 285 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 DUSP21Q9H596 190 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 EPHX3Q9H6B9 360 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 HSF4Q9ULV5 492 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 ANKRD36CQ5JPF3 1778 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 MED1Q15648 1581 aaPredicted RBP7.29□□□□□ -1.24
SCN8A-201ENST00000354534 TRDV1A0A1B0GX56 115 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 GJB5O95377 273 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 DGCR2P98153 550 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 ERASQ7Z444 233 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 ABHD14AQ9BUJ0 271 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 SLC25A17O43808 307 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 CDS2O95674 445 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 ZNF324BQ6AW86 544 aaPredicted RBP7.29□□□□□ -1.24
SCN8A-201ENST00000354534 ZNF880Q6PDB4 577 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 PDPNQ86YL7 162 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 ISOC2Q96AB3 205 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 PPP1CCP36873 323 aaKnown RBP7.29□□□□□ -1.24
SCN8A-201ENST00000354534 SSR4P51571 173 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 COPS9Q8WXC6 57 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 ATOH1Q92858 354 aaPredicted RBP7.29□□□□□ -1.24
SCN8A-201ENST00000354534 TRPM6Q9BX84 2022 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 P01737 135 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 FTH1P19P0C7X4 201 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 DAOP14920 347 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 SDHBP21912 280 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 TEAD1P28347 426 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 CLDN2P57739 230 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 MGAT2Q10469 447 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 C11orf87Q6NUJ2 197 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 SEZ6L2Q6UXD5 910 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 ISCA2Q86U28 154 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 RDH5Q92781 318 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 ACPTQ9BZG2 426 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 Q9N2K0 584 aa7.29□□□□□ -1.24
SCN8A-201ENST00000354534 TP53BP1Q12888 1972 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms