RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 ASF1BQ9NVP2 202 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 OR52A1Q9UKL2 312 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 PRELID3BQ9Y3B1 194 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 ZNF175Q9Y473 711 aa7.58□□□□□ -1.2
TRIM55-204ENST00000353317 DSPP15924 2871 aaKnown RBP7.58□□□□□ -1.2
TRIM55-204ENST00000353317 TMEM269A0A1B0GVZ9 245 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 LRRC3CA6NJW4 275 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 EEF1E1-BLOC1S5C9J1V9 151 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 P2RY10O00398 339 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 PGAM2P15259 253 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 AKR1C4P17516 323 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 VAMP1P23763 118 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 RFC3P40938 356 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 FLI1Q01543 452 aaPredicted RBP7.57□□□□□ -1.2
TRIM55-204ENST00000353317 OR7A5Q15622 319 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 GUCA2BQ16661 112 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 UQCC3Q6UW78 93 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 ZNF813Q6ZN06 617 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 KCTD9Q7L273 389 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 ZDHHC22Q8N966 263 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 INO80EQ8NBZ0 244 aaPredicted RBP7.57□□□□□ -1.2
TRIM55-204ENST00000353317 CHST4Q8NCG5 386 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 OR5T2Q8NGG2 359 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 THAP6Q8TBB0 222 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 ST7LQ8TDW4 575 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 TSNAXQ99598 290 aaKnown RBP7.57□□□□□ -1.2
TRIM55-204ENST00000353317 SAV1Q9H4B6 383 aaPredicted RBP7.57□□□□□ -1.2
TRIM55-204ENST00000353317 CSAG2Q9Y5P2 127 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 FREM1Q5H8C1 2179 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 NCOA6Q14686 2063 aaPredicted RBP7.57□□□□□ -1.2
TRIM55-204ENST00000353317 IGKV1D-43A0A0B4J1Z2 117 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 RAB19A4D1S5 217 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 METTL21EPA6NDL7 271 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 ARGFXA6NJG6 315 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 ACTL6AO96019 429 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 H2AFB1P0C5Y9 115 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 GNB3P16520 340 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 RAB6AP20340 208 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 MPZP25189 248 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 ITGA3P26006 1051 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 SUMO3P55854 103 aaPredicted RBP7.57□□□□□ -1.2
TRIM55-204ENST00000353317 SRSF3P84103 164 aaKnown RBP7.57□□□□□ -1.2
TRIM55-204ENST00000353317 FOXO1Q12778 655 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 RAB12Q6IQ22 244 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 LDLRAD3Q86YD5 345 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 CCDC36Q8IYA8 594 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 NKAIN3Q8N8D7 197 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 SLC26A10Q8NG04 563 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 OR52N4Q8NGI2 321 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 TMEM234Q8WY98 164 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 FGGYQ96C11 551 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 PIK3IP1Q96FE7 263 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 PTGES2Q9H7Z7 377 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 RAB22AQ9UL26 194 aa7.57□□□□□ -1.2
TRIM55-204ENST00000353317 DBX1A6NMT0 343 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 FGF16O43320 207 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 ZNF208O43345 1280 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 IGHMP01871 453 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 MSX1P28360 303 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 CRABP1P29762 137 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 APOBEC1P41238 236 aaKnown RBP7.56□□□□□ -1.2
TRIM55-204ENST00000353317 P2RY4P51582 365 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 ZNF41P51814 821 aaPredicted RBP7.56□□□□□ -1.2
TRIM55-204ENST00000353317 QRFPP83859 136 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 MYBPHQ13203 477 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 TMPPEQ6ZT21 453 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 OR4K17Q8NGC6 315 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 DOCK7Q96N67 2140 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 CHMP1AQ9HD42 196 aaPredicted RBP7.56□□□□□ -1.2
TRIM55-204ENST00000353317 KCNK7Q9Y2U2 307 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 KLF2Q9Y5W3 355 aaPredicted RBP7.56□□□□□ -1.2
TRIM55-204ENST00000353317 SVILO95425 2214 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 PIEZO2Q9H5I5 2752 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 C13orf42A0A1B0GVH6 325 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 LIPT2A6NK58 231 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 EIF1AYO14602 144 aaKnown RBP7.56□□□□□ -1.2
TRIM55-204ENST00000353317 DUS4LO95620 317 aaKnown RBP7.56□□□□□ -1.2
TRIM55-204ENST00000353317 CRHP06850 196 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 VSIG8P0DPA2 414 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 ZNF823P16415 610 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 PSMB6P28072 239 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 SFTPDP35247 375 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 EIF1AXP47813 144 aaKnown RBP7.56□□□□□ -1.2
TRIM55-204ENST00000353317 CYB561P49447 251 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 B3GALT5-AS1P59052 145 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 HFEQ30201 348 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 SHEQ5VZ18 495 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 FAHD2BQ6P2I3 314 aaPredicted RBP7.56□□□□□ -1.2
TRIM55-204ENST00000353317 ZNF704Q6ZNC4 412 aaPredicted RBP7.56□□□□□ -1.2
TRIM55-204ENST00000353317 SVBPQ8N300 66 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 GTPBP8Q8N3Z3 284 aaPredicted RBP7.56□□□□□ -1.2
TRIM55-204ENST00000353317 FOXRED1Q96CU9 486 aaPredicted RBP7.56□□□□□ -1.2
TRIM55-204ENST00000353317 ADAT3Q96EY9 351 aaPredicted RBP7.56□□□□□ -1.2
TRIM55-204ENST00000353317 FAHD2AQ96GK7 314 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 MRGPRX4Q96LA9 322 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 SELENOIQ9C0D9 397 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 SDHAF3Q9NRP4 125 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 CENPMQ9NSP4 180 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 LRFN1Q9P244 771 aa7.56□□□□□ -1.2
TRIM55-204ENST00000353317 SLC5A6Q9Y289 635 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms