RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 LHFPL1Q86WI0 220 aa19.4■□□□□ 0.7
UPF3A-201ENST00000351487 GALNT11Q8NCW6 608 aa19.4■□□□□ 0.7
UPF3A-201ENST00000351487 OR51T1Q8NGJ9 327 aa19.4■□□□□ 0.7
UPF3A-201ENST00000351487 OR5D18Q8NGL1 313 aa19.4■□□□□ 0.7
UPF3A-201ENST00000351487 OR5H2Q8NGV7 314 aa19.4■□□□□ 0.7
UPF3A-201ENST00000351487 PHYHIPLQ96FC7 376 aa19.4■□□□□ 0.7
UPF3A-201ENST00000351487 SGCZQ96LD1 299 aa19.4■□□□□ 0.7
UPF3A-201ENST00000351487 CDX2Q99626 313 aaPredicted RBP19.4■□□□□ 0.7
UPF3A-201ENST00000351487 SRXN1Q9BYN0 137 aa19.4■□□□□ 0.7
UPF3A-201ENST00000351487 FAM25EA8MYX2 175 aa19.4■□□□□ 0.7
UPF3A-201ENST00000351487 MTRF1O75570 445 aaKnown RBP19.4■□□□□ 0.7
UPF3A-201ENST00000351487 FAHP16930 419 aa19.4■□□□□ 0.7
UPF3A-201ENST00000351487 FPR2P25090 351 aa19.4■□□□□ 0.7
UPF3A-201ENST00000351487 ARFRP1Q13795 201 aa19.4■□□□□ 0.7
UPF3A-201ENST00000351487 KCTD9Q7L273 389 aa19.4■□□□□ 0.7
UPF3A-201ENST00000351487 THAP6Q8TBB0 222 aa19.4■□□□□ 0.7
UPF3A-201ENST00000351487 HAS2Q92819 552 aa19.4■□□□□ 0.7
UPF3A-201ENST00000351487 TMEM230Q96A57 120 aa19.4■□□□□ 0.7
UPF3A-201ENST00000351487 SDK2Q58EX2 2172 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 STMND1H3BQB6 276 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 CRHP06850 196 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 B3GALT5-AS1P59052 145 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 ZNF468Q5VIY5 522 aaPredicted RBP19.39■□□□□ 0.69
UPF3A-201ENST00000351487 SPTSSAQ969W0 71 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 CYYR1Q96J86 154 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 PPA2Q9H2U2 334 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 PLEK2Q9NYT0 353 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 SPEF1Q9Y4P9 236 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 PCDHGA1Q9Y5H4 931 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 A0A0B4J2A0 478 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 A0A1B0GW55 424 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 DUX4L2P0CJ85 424 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 DUX4L3P0CJ86 424 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 DUX4L4P0CJ87 422 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 DUX4L5P0CJ88 424 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 DUX4L6P0CJ89 424 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 DUX4L7P0CJ90 424 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 AMY2BP19961 511 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 GLRX5Q86SX6 157 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 SLC38A6Q8IZM9 456 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 NPRL2Q8WTW4 380 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 FBXO17Q96EF6 278 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 ZC3H10Q96K80 434 aaKnown RBP19.39■□□□□ 0.69
UPF3A-201ENST00000351487 SCGB3A2Q96PL1 93 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 NMES1Q9C002 83 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 DUX4Q9UBX2 424 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 SHPKQ9UHJ6 478 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 PIGLQ9Y2B2 252 aa19.39■□□□□ 0.69
UPF3A-201ENST00000351487 C19orf67A6NJJ6 358 aa19.38■□□□□ 0.69
UPF3A-201ENST00000351487 SERPINE3A8MV23 424 aa19.38■□□□□ 0.69
UPF3A-201ENST00000351487 CA11O75493 328 aa19.38■□□□□ 0.69
UPF3A-201ENST00000351487 IGHEP01854 428 aa19.38■□□□□ 0.69
UPF3A-201ENST00000351487 GP1BAP07359 652 aa19.38■□□□□ 0.69
UPF3A-201ENST00000351487 SRD5A2P31213 254 aa19.38■□□□□ 0.69
UPF3A-201ENST00000351487 LUMP51884 338 aaPredicted RBP19.38■□□□□ 0.69
UPF3A-201ENST00000351487 TAS2R46P59540 309 aa19.38■□□□□ 0.69
UPF3A-201ENST00000351487 RAC3P60763 192 aa19.38■□□□□ 0.69
UPF3A-201ENST00000351487 ARL6IP1Q15041 203 aa19.38■□□□□ 0.69
UPF3A-201ENST00000351487 TUSC1Q2TAM9 212 aa19.38■□□□□ 0.69
UPF3A-201ENST00000351487 RELL2Q8NC24 303 aaPredicted RBP19.38■□□□□ 0.69
UPF3A-201ENST00000351487 PXT1Q8NFP0 134 aa19.38■□□□□ 0.69
UPF3A-201ENST00000351487 SLC39A1Q9NY26 324 aa19.38■□□□□ 0.69
UPF3A-201ENST00000351487 MBD2Q9UBB5 411 aa19.38■□□□□ 0.69
UPF3A-201ENST00000351487 TRBV6-7A0A0A0MS04 114 aa19.37■□□□□ 0.69
UPF3A-201ENST00000351487 DHRS7CA6NNS2 312 aa19.37■□□□□ 0.69
UPF3A-201ENST00000351487 SFT2D2O95562 160 aa19.37■□□□□ 0.69
UPF3A-201ENST00000351487 HPNP05981 417 aa19.37■□□□□ 0.69
UPF3A-201ENST00000351487 DBHP09172 617 aa19.37■□□□□ 0.69
UPF3A-201ENST00000351487 CRYGSP22914 178 aa19.37■□□□□ 0.69
UPF3A-201ENST00000351487 SERPINF1P36955 418 aa19.37■□□□□ 0.69
UPF3A-201ENST00000351487 NPY4RP50391 375 aa19.37■□□□□ 0.69
UPF3A-201ENST00000351487 DMRTC1Q5HYR2 192 aa19.37■□□□□ 0.69
UPF3A-201ENST00000351487 MOB3CQ70IA8 216 aa19.37■□□□□ 0.69
UPF3A-201ENST00000351487 TMEM17Q86X19 198 aa19.37■□□□□ 0.69
UPF3A-201ENST00000351487 GPR137CQ8N3F9 429 aa19.37■□□□□ 0.69
UPF3A-201ENST00000351487 OR52H1Q8NGJ2 320 aa19.37■□□□□ 0.69
UPF3A-201ENST00000351487 PECRQ9BY49 303 aa19.37■□□□□ 0.69
UPF3A-201ENST00000351487 DNTTIP1Q9H147 329 aa19.37■□□□□ 0.69
UPF3A-201ENST00000351487 CHMP1AQ9HD42 196 aaPredicted RBP19.37■□□□□ 0.69
UPF3A-201ENST00000351487 OSGIN2Q9Y236 505 aa19.37■□□□□ 0.69
UPF3A-201ENST00000351487 COL27A1Q8IZC6 1860 aaPredicted RBP19.37■□□□□ 0.69
UPF3A-201ENST00000351487 RTTNQ86VV8 2226 aa19.37■□□□□ 0.69
UPF3A-201ENST00000351487 EEF1E1-BLOC1S5C9J1V9 151 aa19.37■□□□□ 0.69
UPF3A-201ENST00000351487 PDGFBP01127 241 aaPredicted RBP19.37■□□□□ 0.69
UPF3A-201ENST00000351487 HOXD4P09016 255 aaPredicted RBP19.37■□□□□ 0.69
UPF3A-201ENST00000351487 FCGR2AP12318 317 aa19.37■□□□□ 0.69
UPF3A-201ENST00000351487 CPT2P23786 658 aa19.37■□□□□ 0.69
UPF3A-201ENST00000351487 BLVRBP30043 206 aaPredicted RBP19.37■□□□□ 0.69
UPF3A-201ENST00000351487 CYCSP99999 105 aaKnown RBP19.37■□□□□ 0.69
UPF3A-201ENST00000351487 ATXN7L3Q14CW9 347 aaPredicted RBP19.37■□□□□ 0.69
UPF3A-201ENST00000351487 NSUN5P2Q63ZY6 315 aa19.37■□□□□ 0.69
UPF3A-201ENST00000351487 ZNF837Q96EG3 531 aaPredicted RBP19.37■□□□□ 0.69
UPF3A-201ENST00000351487 NCKAP5O14513 1909 aa19.36■□□□□ 0.69
UPF3A-201ENST00000351487 SERPINA2P20848 420 aa19.36■□□□□ 0.69
UPF3A-201ENST00000351487 PSMB6P28072 239 aa19.36■□□□□ 0.69
UPF3A-201ENST00000351487 CHAF1BQ13112 559 aa19.36■□□□□ 0.69
UPF3A-201ENST00000351487 PPA1Q15181 289 aa19.36■□□□□ 0.69
UPF3A-201ENST00000351487 RAB35Q15286 201 aa19.36■□□□□ 0.69
UPF3A-201ENST00000351487 RTL6Q6ICC9 239 aa19.36■□□□□ 0.69
UPF3A-201ENST00000351487 INO80EQ8NBZ0 244 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms