RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 EIF4EP06730 217 aaKnown RBP10.82□□□□□ -0.68
SMAD9-201ENST00000350148 SCGB2A2Q13296 93 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 CDH26Q8IXH8 852 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 FAM71CQ8NEG0 241 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 EGLN1Q9GZT9 426 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 SLC2A9Q9NRM0 540 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 C1orf123Q9NWV4 160 aa10.82□□□□□ -0.68
SMAD9-201ENST00000350148 C5orf49A4QMS7 147 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 LRRC30A6NM36 301 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 PHOX2AO14813 284 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 GAAP10253 952 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 TMEM211Q6ICI0 200 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 SKA3Q8IX90 412 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 USB1Q9BQ65 265 aaKnown RBP10.81□□□□□ -0.68
SMAD9-201ENST00000350148 ZNF251Q9BRH9 671 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 NXPH2O95156 264 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 CRYAAP02489 173 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 HOXD4P09016 255 aaPredicted RBP10.81□□□□□ -0.68
SMAD9-201ENST00000350148 PTTG1IPP53801 180 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 UBE2KP61086 200 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 FMODQ06828 376 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 OR8G1Q15617 311 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 GSG1Q2KHT4 349 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 B3GNTL1Q67FW5 361 aaPredicted RBP10.81□□□□□ -0.68
SMAD9-201ENST00000350148 KISS1RQ969F8 398 aaPredicted RBP10.81□□□□□ -0.68
SMAD9-201ENST00000350148 C20orf85Q9H1P6 137 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 OR51B6Q9H340 312 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 SERPINE3A8MV23 424 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 GSK3AP49840 483 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 OR10K2Q6IF99 312 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 CD163Q86VB7 1156 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 Q8IYB0 196 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 FAM185AQ8N0U4 392 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 MEIS3P1A6NDR6 274 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 RECKO95980 971 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 KNG1P01042 644 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 IL2RGP31785 369 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 KIR2DL3P43628 341 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 CATR1Q13166 79 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 TEX30Q5JUR7 227 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 LINC00469Q8N7U9 141 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 OR52I2Q8NH67 350 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 CHST6Q9GZX3 395 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 ZNF275Q9NSD4 429 aaPredicted RBP10.81□□□□□ -0.68
SMAD9-201ENST00000350148 FBXL2Q9UKC9 423 aa10.81□□□□□ -0.68
SMAD9-201ENST00000350148 TERTO14746 1132 aaKnown RBP10.8□□□□□ -0.68
SMAD9-201ENST00000350148 HLA-AP01891 365 aaKnown RBP10.8□□□□□ -0.68
SMAD9-201ENST00000350148 CSF3P09919 207 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 PPT1P50897 306 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 OR10A3P58181 314 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 FCN2Q15485 313 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 RDH10Q8IZV5 341 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 MITD1Q8WV92 249 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 RNF133Q8WVZ7 376 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 PATZ1Q9HBE1 687 aaKnown RBP10.8□□□□□ -0.68
SMAD9-201ENST00000350148 NKX6-3A6NJ46 265 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 KLF4O43474 513 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 IGHV3-9P01782 118 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 GABRA4P48169 554 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 SRP9P49458 86 aaKnown RBP10.8□□□□□ -0.68
SMAD9-201ENST00000350148 AKR1C2P52895 323 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 FXYD4P59646 89 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 ERVK-16P61578 105 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 RPP30P78346 268 aaKnown RBP10.8□□□□□ -0.68
SMAD9-201ENST00000350148 GUK1Q16774 197 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 H3F3CQ6NXT2 135 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.8□□□□□ -0.68
SMAD9-201ENST00000350148 TMEM105Q8N8V8 129 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 TMEM229BQ8NBD8 167 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 DCUN1D4Q92564 292 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 ALKBH3Q96Q83 286 aaPredicted RBP10.8□□□□□ -0.68
SMAD9-201ENST00000350148 ACKR4Q9NPB9 350 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 GAR1Q9NY12 217 aaKnown RBP10.8□□□□□ -0.68
SMAD9-201ENST00000350148 LSM2Q9Y333 95 aaKnown RBP10.8□□□□□ -0.68
SMAD9-201ENST00000350148 TMEM229AB2RXF0 380 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 RGS11O94810 467 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 CDAP32320 146 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 RPS27P42677 84 aaKnown RBP10.8□□□□□ -0.68
SMAD9-201ENST00000350148 SEC61A1P61619 476 aaKnown RBP10.8□□□□□ -0.68
SMAD9-201ENST00000350148 MRPS34P82930 218 aaKnown RBP10.8□□□□□ -0.68
SMAD9-201ENST00000350148 C1QL3Q5VWW1 255 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 TFAP2EQ6VUC0 442 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 CATSPERDQ86XM0 798 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 ST6GAL2Q96JF0 529 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 RBM14Q96PK6 669 aaKnown RBP10.8□□□□□ -0.68
SMAD9-201ENST00000350148 NEUROG3Q9Y4Z2 214 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 KNL1Q8NG31 2342 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 LGALS8O00214 317 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 CTDSPLO15194 276 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 ZNF709Q8N972 641 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 ZNF439Q8NDP4 499 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 OR51F2Q8NH61 342 aa10.8□□□□□ -0.68
SMAD9-201ENST00000350148 ING1Q9UK53 422 aaPredicted RBP10.8□□□□□ -0.68
SMAD9-201ENST00000350148 NUP214P35658 2090 aaPredicted RBP10.8□□□□□ -0.68
SMAD9-201ENST00000350148 SPAARA0A1B0GVQ0 90 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 TRIM77I1YAP6 450 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 GPR137BO60478 399 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 CTSBP07858 339 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 MSMO1Q15800 293 aa10.79□□□□□ -0.68
SMAD9-201ENST00000350148 SPINK14Q6IE38 97 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms