RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 HRH4Q9H3N8 390 aa15.9■□□□□ 0.14
PTP4A3-202ENST00000349124 WDFY4Q6ZS81 3184 aa15.9■□□□□ 0.14
PTP4A3-202ENST00000349124 COL5A1P20908 1838 aaPredicted RBP15.9■□□□□ 0.14
PTP4A3-202ENST00000349124 PTGFRP43088 359 aa15.9■□□□□ 0.14
PTP4A3-202ENST00000349124 RSPO1Q2MKA7 263 aaPredicted RBP15.9■□□□□ 0.14
PTP4A3-202ENST00000349124 MST1LQ2TV78 715 aa15.9■□□□□ 0.14
PTP4A3-202ENST00000349124 RNF138Q8WVD3 245 aa15.9■□□□□ 0.14
PTP4A3-202ENST00000349124 PIGTQ969N2 578 aa15.9■□□□□ 0.14
PTP4A3-202ENST00000349124 PGAM5Q96HS1 289 aa15.9■□□□□ 0.14
PTP4A3-202ENST00000349124 RASL10BQ96S79 203 aa15.9■□□□□ 0.14
PTP4A3-202ENST00000349124 PURGQ9UJV8 347 aaKnown RBP15.9■□□□□ 0.14
PTP4A3-202ENST00000349124 ANAPC10Q9UM13 185 aa15.9■□□□□ 0.14
PTP4A3-202ENST00000349124 F8W036 122 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 MASP2O00187 686 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 SCGNO76038 276 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 SFTPBP07988 381 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 TAS2R31P59538 309 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 S100A10P60903 97 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 BLOC1S1P78537 153 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 CARFQ8N187 725 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 OR56B1Q8NGI3 324 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 STOML3Q8TAV4 291 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 SSC4DQ8WTU2 575 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 OXGR1Q96P68 337 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 TMEM100Q9NV29 134 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 A0A1W2PQM1 296 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 ZNF705EA8MWA4 302 aaPredicted RBP15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 ZFAND5O76080 213 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 HPNP05981 417 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 RPS2P15880 293 aaKnown RBP15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 RCC1P18754 421 aaPredicted RBP15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 IL32P24001 234 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 DCDP81605 110 aaKnown RBP15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 ACY1Q03154 408 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 SLC25A53Q5H9E4 307 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 C6orf201Q7Z4U5 140 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 ARRDC1Q8N5I2 433 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 ZNF837Q96EG3 531 aaPredicted RBP15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 ZNF385AQ96PM9 386 aaKnown RBP15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 SPSB2Q99619 263 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 TREM1Q9NP99 234 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 MUC3AQ02505 3323 aa15.89■□□□□ 0.13
PTP4A3-202ENST00000349124 RAB19A4D1S5 217 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 PMS2P1A4D2B8 440 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 DOK3Q7L591 496 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 OR5L2Q8NGL0 311 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 GNRHR2Q96P88 292 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 UCN2Q96RP3 112 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 CDC6Q99741 560 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 SLC26A1Q9H2B4 701 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 HPF1Q9NWY4 346 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 ZNF629Q9UEG4 869 aaPredicted RBP15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 OSGIN2Q9Y236 505 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 AGPAT2O15120 278 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 FCGR2AP12318 317 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 ID4P47928 161 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 AFF3P51826 1226 aaKnown RBP15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 HIST3H3Q16695 136 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 RABEPKQ7Z6M1 372 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 LHFPL1Q86WI0 220 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 KMT5CQ86Y97 462 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 CCDC36Q8IYA8 594 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 RNF141Q8WVD5 230 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 NUDT16L1Q9BRJ7 211 aaKnown RBP15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 URM1Q9BTM9 101 aaKnown RBP15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 ZNF160Q9HCG1 818 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 ZNF701Q9NV72 531 aaPredicted RBP15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 MCTS1Q9ULC4 181 aaKnown RBP15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 EML6Q6ZMW3 1958 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 MBTPS2O43462 519 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 NPBWR1P48145 328 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 CCL7P80098 99 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 RPL7L1Q6DKI1 246 aaKnown RBP15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 OR2A2Q6IF42 318 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 CLEC9AQ6UXN8 241 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 PEG10Q86TG7 708 aaKnown RBP15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 PECRQ9BY49 303 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 MOB1AQ9H8S9 216 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 RAB18Q9NP72 206 aa15.88■□□□□ 0.13
PTP4A3-202ENST00000349124 DHRS7CA6NNS2 312 aa15.87■□□□□ 0.13
PTP4A3-202ENST00000349124 GABRR1P24046 479 aa15.87■□□□□ 0.13
PTP4A3-202ENST00000349124 FPR2P25090 351 aa15.87■□□□□ 0.13
PTP4A3-202ENST00000349124 CYCSP99999 105 aaKnown RBP15.87■□□□□ 0.13
PTP4A3-202ENST00000349124 SCRN3Q0VDG4 424 aa15.87■□□□□ 0.13
PTP4A3-202ENST00000349124 PRSS54Q6PEW0 395 aa15.87■□□□□ 0.13
PTP4A3-202ENST00000349124 FAM89BQ8N5H3 189 aa15.87■□□□□ 0.13
PTP4A3-202ENST00000349124 DEFB126Q9BYW3 111 aa15.87■□□□□ 0.13
PTP4A3-202ENST00000349124 CEACAM18A8MTB9 384 aa15.87■□□□□ 0.13
PTP4A3-202ENST00000349124 SIGLEC6O43699 453 aa15.87■□□□□ 0.13
PTP4A3-202ENST00000349124 CCL1P22362 96 aa15.87■□□□□ 0.13
PTP4A3-202ENST00000349124 NFYBP25208 207 aa15.87■□□□□ 0.13
PTP4A3-202ENST00000349124 MSX1P28360 303 aa15.87■□□□□ 0.13
PTP4A3-202ENST00000349124 SPEM2Q0P670 501 aa15.87■□□□□ 0.13
PTP4A3-202ENST00000349124 H3F3CQ6NXT2 135 aa15.87■□□□□ 0.13
PTP4A3-202ENST00000349124 UQCC3Q6UW78 93 aa15.87■□□□□ 0.13
PTP4A3-202ENST00000349124 NAXEQ8NCW5 288 aa15.87■□□□□ 0.13
PTP4A3-202ENST00000349124 PLA2G2EQ9NZK7 142 aa15.87■□□□□ 0.13
PTP4A3-202ENST00000349124 PISDQ9UG56 409 aa15.87■□□□□ 0.13
PTP4A3-202ENST00000349124 MSTNO14793 375 aa15.86■□□□□ 0.13
PTP4A3-202ENST00000349124 LRP3O75074 770 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms