RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 OIT3Q8WWZ8 545 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 PHYHIPQ92561 330 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 EXTL1Q92935 676 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 SLAMF6Q96DU3 332 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 PELI1Q96FA3 418 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 ADAT1Q9BUB4 502 aaKnown RBP9.73□□□□□ -0.85
CLCN6-202ENST00000346436 TXNIPQ9H3M7 391 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 ARID1AO14497 2285 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 A0A0G2JMZ2 1700 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 LRRC37A2A6NM11 1700 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 RPS10-NUDT3A0A1W2PQS6 291 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 SIRPB1O00241 398 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 HS3ST1O14792 307 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 CD3DP04234 171 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 CRYBA2P53672 197 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 PLPP5Q8NEB5 264 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 OR10D3Q8NH80 312 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 REEP6Q96HR9 211 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 ADGRL4Q9HBW9 690 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 NECAP2Q9NVZ3 263 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 NEUROG3Q9Y4Z2 214 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 SLCO1B1Q9Y6L6 691 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 MGAMO43451 1857 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 TMEM235A6NFC5 223 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 CLDN6P56747 220 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 PMPCAQ10713 525 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 ACKR1Q16570 336 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 TEX261Q6UWH6 196 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 C1orf174Q8IYL3 243 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 OR2L13Q8N349 312 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 OR4C3Q8NH37 302 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 PECRQ9BY49 303 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 LAMP3Q9UQV4 416 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 U3KQ87 197 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 MOSPD3O75425 235 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 CHRM2P08172 466 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 ALKBH6Q3KRA9 238 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 NHLRC1Q6VVB1 395 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 SFTPA2Q8IWL1 248 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 GPR119Q8TDV5 335 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 TET1Q8NFU7 2136 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 SIP14410 1827 aa9.73□□□□□ -0.85
CLCN6-202ENST00000346436 LOC100289279A0A1B0GTE1 492 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 NPIPB8E9PQR5 432 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 CXCL3P19876 107 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 PPT1P50897 306 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 ATP5J2P56134 94 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 UBE2G2P60604 165 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 MFGE8Q08431 387 aaPredicted RBP9.72□□□□□ -0.85
CLCN6-202ENST00000346436 HNF4GQ14541 408 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 FAM209AQ5JX71 171 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 PLXDC2Q6UX71 529 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 OR10G3Q8NGC4 313 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 COX14Q96I36 57 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 OR2A5Q96R48 311 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 KCNK15Q9H427 330 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 GPR173Q9NS66 373 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 TNFRSF19Q9NS68 423 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 SERTAD4Q9NUC0 356 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 TMEM11P17152 192 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 SDHAP31040 664 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 P2RX3P56373 397 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 SLC35B1P78383 322 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 ZBTB37Q5TC79 503 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 SPINK14Q6IE38 97 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 C17orf107Q6ZR85 190 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 ZAR1Q86SH2 424 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 ALKBH3Q96Q83 286 aaPredicted RBP9.72□□□□□ -0.85
CLCN6-202ENST00000346436 TMEM208Q9BTX3 173 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 BANF2Q9H503 90 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 SAP30LQ9HAJ7 183 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 AHRRA9YTQ3 701 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 ALG1L2C9J202 215 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 CELA2BP08218 269 aaPredicted RBP9.72□□□□□ -0.85
CLCN6-202ENST00000346436 ZNF770Q6IQ21 691 aaPredicted RBP9.72□□□□□ -0.85
CLCN6-202ENST00000346436 Q6ZRG5 221 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 NOXO1Q8NFA2 376 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 OR6M1Q8NGM8 313 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 CNTNAP3BQ96NU0 1288 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 EXOGQ9Y2C4 368 aaKnown RBP9.72□□□□□ -0.85
CLCN6-202ENST00000346436 SIRT4Q9Y6E7 314 aaPredicted RBP9.72□□□□□ -0.85
CLCN6-202ENST00000346436 PSME4Q14997 1843 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 OR6C68A6NDL8 312 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 DNASE2O00115 360 aaPredicted RBP9.72□□□□□ -0.85
CLCN6-202ENST00000346436 CLDN1O95832 211 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 OR4A8P0C604 315 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 GABRA4P48169 554 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 GGTLC2Q14390 218 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 CD300LDQ6UXZ3 194 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 NAA40Q86UY6 237 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 SCNM1Q9BWG6 230 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 ADAM20O43506 726 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 ZNF14P17017 642 aaPredicted RBP9.72□□□□□ -0.85
CLCN6-202ENST00000346436 NPY4RP50391 375 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 ARL11Q969Q4 196 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 DLL4Q9NR61 685 aa9.72□□□□□ -0.85
CLCN6-202ENST00000346436 LSM2Q9Y333 95 aaKnown RBP9.72□□□□□ -0.85
CLCN6-202ENST00000346436 TBX19O60806 448 aa9.71□□□□□ -0.85
CLCN6-202ENST00000346436 LYZL6O75951 148 aa9.71□□□□□ -0.85
CLCN6-202ENST00000346436 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms