RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 ZNF646O15015 1829 aaPredicted RBP17.55■□□□□ 0.4
HDAC4-201ENST00000345617 PGA4P0DJD7 388 aa17.55■□□□□ 0.4
HDAC4-201ENST00000345617 PGA5P0DJD9 388 aa17.55■□□□□ 0.4
HDAC4-201ENST00000345617 FUT6P51993 359 aa17.55■□□□□ 0.4
HDAC4-201ENST00000345617 LRIT1Q9P2V4 623 aa17.55■□□□□ 0.4
HDAC4-201ENST00000345617 LSMEM1Q8N8F7 131 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 CDRT15L2A8MXV6 281 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 CD1CP29017 333 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 RPL29P47914 159 aaKnown RBP17.54■□□□□ 0.4
HDAC4-201ENST00000345617 SEBOXQ9HB31 216 aaPredicted RBP17.54■□□□□ 0.4
HDAC4-201ENST00000345617 KIAA1551Q9HCM1 1747 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 H3BNC9 293 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 HIST1H1BP16401 226 aaKnown RBP17.54■□□□□ 0.4
HDAC4-201ENST00000345617 OR2G2Q8NGZ5 317 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 TOE1Q96GM8 510 aaKnown RBP17.54■□□□□ 0.4
HDAC4-201ENST00000345617 LPAR3Q9UBY5 353 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 BMPR1BO00238 502 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 PRR27Q6MZM9 219 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 OR52L2PQ8NGH6 319 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 MARCH1Q8TCQ1 289 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 PLPP1O14494 284 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 KRASP01116 189 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 FGF2P09038 288 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 OR52N4Q8NGI2 321 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 PELI1Q96FA3 418 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 OCIAD1Q9NX40 245 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 ST3GAL6Q9Y274 331 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 LINC01387J3KSC0 135 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 DCTDP32321 178 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 CTBSQ01459 385 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 H1FXQ92522 213 aaKnown RBP17.54■□□□□ 0.4
HDAC4-201ENST00000345617 ANGPTL4Q9BY76 406 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 SLIRPQ9GZT3 109 aaKnown RBP17.54■□□□□ 0.4
HDAC4-201ENST00000345617 OR5V1Q9UGF6 321 aa17.54■□□□□ 0.4
HDAC4-201ENST00000345617 SLC17A2O00624 439 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 ZNF749O43361 778 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 SEMA7AO75326 666 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 BTF3P20290 206 aaKnown RBP17.53■□□□□ 0.4
HDAC4-201ENST00000345617 IGSF11Q5DX21 431 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 TMEM56Q96MV1 263 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 EDEM2Q9BV94 578 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 GTF3C1Q12789 2109 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 SHISA6Q6ZSJ9 500 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 RIMKLAQ8IXN7 391 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 COA3Q9Y2R0 106 aaPredicted RBP17.53■□□□□ 0.4
HDAC4-201ENST00000345617 GJA4P35212 333 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 Q96M85 177 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 COL25A1Q9BXS0 654 aaPredicted RBP17.53■□□□□ 0.4
HDAC4-201ENST00000345617 FZD2Q14332 565 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 FXNQ16595 210 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 SLC16A11Q8NCK7 471 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 DOK1Q99704 481 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 LRRK1Q38SD2 2015 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 COL5A1-AS1Q5SY13 56 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 METRNLQ641Q3 311 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 DHRS7BQ6IAN0 325 aaPredicted RBP17.53■□□□□ 0.4
HDAC4-201ENST00000345617 UQCC1Q9NVA1 299 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 NAT8Q9UHE5 227 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 PITPNC1Q9UKF7 332 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 ARFGEF3Q5TH69 2177 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 SH2D7A6NKC9 451 aaPredicted RBP17.53■□□□□ 0.4
HDAC4-201ENST00000345617 OR3A1P47881 315 aa17.53■□□□□ 0.4
HDAC4-201ENST00000345617 MEIKINA0A087WXM9 373 aa17.52■□□□□ 0.4
HDAC4-201ENST00000345617 A0A1B0GTQ1 180 aa17.52■□□□□ 0.4
HDAC4-201ENST00000345617 CLN3Q13286 438 aa17.52■□□□□ 0.4
HDAC4-201ENST00000345617 OR1L1Q8NH94 360 aa17.52■□□□□ 0.4
HDAC4-201ENST00000345617 PDE6DO43924 150 aa17.52■□□□□ 0.4
HDAC4-201ENST00000345617 IL13RA2Q14627 380 aa17.52■□□□□ 0.4
HDAC4-201ENST00000345617 DOLPP1Q86YN1 238 aa17.52■□□□□ 0.4
HDAC4-201ENST00000345617 ZNF552Q9H707 407 aaPredicted RBP17.52■□□□□ 0.4
HDAC4-201ENST00000345617 GPR37O15354 613 aa17.52■□□□□ 0.4
HDAC4-201ENST00000345617 GPANK1O95872 356 aa17.52■□□□□ 0.4
HDAC4-201ENST00000345617 S100A4P26447 101 aaKnown RBP17.52■□□□□ 0.4
HDAC4-201ENST00000345617 TMEM265A0A087WTH1 108 aa17.52■□□□□ 0.4
HDAC4-201ENST00000345617 OR5AL1P0C617 328 aa17.52■□□□□ 0.4
HDAC4-201ENST00000345617 OR10J1P30954 320 aa17.52■□□□□ 0.4
HDAC4-201ENST00000345617 OR8D4Q8NGM9 314 aa17.52■□□□□ 0.4
HDAC4-201ENST00000345617 PBOV1Q9GZY1 135 aa17.52■□□□□ 0.4
HDAC4-201ENST00000345617 MRPS2Q9Y399 296 aaKnown RBP17.52■□□□□ 0.4
HDAC4-201ENST00000345617 H0YIG0 161 aa17.52■□□□□ 0.4
HDAC4-201ENST00000345617 ZNF737O75373 536 aa17.52■□□□□ 0.4
HDAC4-201ENST00000345617 OR2A2Q6IF42 318 aa17.52■□□□□ 0.4
HDAC4-201ENST00000345617 TEX37Q96LM6 180 aa17.52■□□□□ 0.4
HDAC4-201ENST00000345617 HINT3Q9NQE9 182 aaKnown RBP17.52■□□□□ 0.4
HDAC4-201ENST00000345617 PMS2P1A4D2B8 440 aa17.52■□□□□ 0.39
HDAC4-201ENST00000345617 PYCARD-AS1I3L0S3 204 aa17.52■□□□□ 0.39
HDAC4-201ENST00000345617 CD22P20273 847 aa17.52■□□□□ 0.39
HDAC4-201ENST00000345617 HTR1DP28221 377 aa17.52■□□□□ 0.39
HDAC4-201ENST00000345617 OR2T10Q8NGZ9 312 aa17.52■□□□□ 0.39
HDAC4-201ENST00000345617 OR8B4Q96RC9 309 aa17.52■□□□□ 0.39
HDAC4-201ENST00000345617 PAAF1Q9BRP4 392 aa17.52■□□□□ 0.39
HDAC4-201ENST00000345617 PLXNB2O15031 1838 aa17.52■□□□□ 0.39
HDAC4-201ENST00000345617 OSR2Q8N2R0 312 aa17.52■□□□□ 0.39
HDAC4-201ENST00000345617 CALHM2Q9HA72 323 aa17.52■□□□□ 0.39
HDAC4-201ENST00000345617 DHRS2Q13268 280 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 PRRX2Q99811 253 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 SCCPDHQ8NBX0 429 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 OR51E1Q8TCB6 317 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 RCL1Q9Y2P8 373 aaKnown RBP17.51■□□□□ 0.39
HDAC4-201ENST00000345617 SIPA1L3O60292 1781 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms