RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 EMC6Q9BV81 110 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 SCRT1Q9BWW7 348 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 PARPBPQ9NWS1 579 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 LUZP4Q9P127 313 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 PCNX3Q9H6A9 2034 aa13.17□□□□□ -0.3
CLCN1-201ENST00000343257 C2orf72A6NCS6 295 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 GPR89AB7ZAQ6 455 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 MASP2O00187 686 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 SLC31A2O15432 143 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 F10P00742 488 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 GPR89BP0CG08 455 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 LYL1P12980 280 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 CHATP28329 748 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 NHLH2Q02577 135 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 ROM1Q03395 351 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 PCK2Q16822 640 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 C21orf62-AS1Q17RA5 79 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 TSPO2Q5TGU0 170 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 TMEM156Q8N614 296 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 TOMM40LQ969M1 308 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 UBQLN4Q9NRR5 601 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 MED29Q9NX70 200 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 CCDC163A0A0D9SF12 145 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 BGLAPP02818 100 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 FPR2P25090 351 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 UBE2KP61086 200 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 LSM6P62312 80 aaKnown RBP13.16□□□□□ -0.3
CLCN1-201ENST00000343257 RPS21P63220 83 aaKnown RBP13.16□□□□□ -0.3
CLCN1-201ENST00000343257 QRFPP83859 136 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 ZNF117Q03924 483 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 GGNBP1Q5YKI7 109 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 NKAIN3Q8N8D7 197 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 ZNF700Q9H0M5 742 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 SDHAF3Q9NRP4 125 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 PPP4R1LQ9P1A2 415 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 PPP1R2P9O14990 202 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 HIST1H2BKO60814 126 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 HIST1H2BJP06899 126 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 ZNF20P17024 532 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 ANOS1P23352 680 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 HIST1H2BOP23527 126 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 G0S2P27469 103 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 HIST1H2BBP33778 126 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 HIST1H2BDP58876 126 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 HIST1H2BCP62807 126 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 SLC35A1P78382 337 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 HIST2H2BEQ16778 126 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.16□□□□□ -0.3
CLCN1-201ENST00000343257 OR2T2Q6IF00 324 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 TGIF2LXQ8IUE1 241 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 HIST1H2BHQ93079 126 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 RAB39BQ96DA2 213 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 LURAP1Q96LR2 239 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 HIST1H2BNQ99877 126 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 HIST1H2BMQ99879 126 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 NUDT22Q9BRQ3 303 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 ATG101Q9BSB4 218 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 LMAN1LQ9HAT1 526 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 PISDQ9UG56 409 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 POMT1Q9Y6A1 747 aa13.16□□□□□ -0.3
CLCN1-201ENST00000343257 TERTO14746 1132 aaKnown RBP13.15□□□□□ -0.3
CLCN1-201ENST00000343257 KAT7O95251 611 aa13.15□□□□□ -0.3
CLCN1-201ENST00000343257 HIST1H1DP16402 221 aaKnown RBP13.15□□□□□ -0.3
CLCN1-201ENST00000343257 MPZP25189 248 aa13.15□□□□□ -0.3
CLCN1-201ENST00000343257 GPR3P46089 330 aa13.15□□□□□ -0.3
CLCN1-201ENST00000343257 NKX6-1P78426 367 aaPredicted RBP13.15□□□□□ -0.3
CLCN1-201ENST00000343257 RHEBQ15382 184 aa13.15□□□□□ -0.3
CLCN1-201ENST00000343257 C1orf140Q5VVS0 124 aa13.15□□□□□ -0.3
CLCN1-201ENST00000343257 OPN5Q6U736 354 aa13.15□□□□□ -0.3
CLCN1-201ENST00000343257 MAMDC2Q7Z304 686 aaPredicted RBP13.15□□□□□ -0.3
CLCN1-201ENST00000343257 ZFP62Q8NB50 900 aaPredicted RBP13.15□□□□□ -0.3
CLCN1-201ENST00000343257 BAHD1Q8TBE0 780 aaPredicted RBP13.15□□□□□ -0.3
CLCN1-201ENST00000343257 TMEM59Q9BXS4 323 aa13.15□□□□□ -0.3
CLCN1-201ENST00000343257 C14orf166Q9Y224 244 aaKnown RBP13.15□□□□□ -0.3
CLCN1-201ENST00000343257 MED12Q93074 2177 aa13.15□□□□□ -0.3
CLCN1-201ENST00000343257 TTRP02766 147 aa13.15□□□□□ -0.3
CLCN1-201ENST00000343257 HEXBP07686 556 aa13.15□□□□□ -0.3
CLCN1-201ENST00000343257 HIST1H1BP16401 226 aaKnown RBP13.15□□□□□ -0.3
CLCN1-201ENST00000343257 OMGP23515 440 aa13.15□□□□□ -0.3
CLCN1-201ENST00000343257 CRABP1P29762 137 aa13.15□□□□□ -0.3
CLCN1-201ENST00000343257 GJA4P35212 333 aa13.15□□□□□ -0.3
CLCN1-201ENST00000343257 ERVFRD-1P60508 538 aa13.15□□□□□ -0.3
CLCN1-201ENST00000343257 GPM6BQ13491 265 aa13.15□□□□□ -0.3
CLCN1-201ENST00000343257 PRSS58Q8IYP2 241 aa13.15□□□□□ -0.3
CLCN1-201ENST00000343257 OR51T1Q8NGJ9 327 aa13.15□□□□□ -0.3
CLCN1-201ENST00000343257 B3GALT5Q9Y2C3 310 aa13.15□□□□□ -0.3
CLCN1-201ENST00000343257 IGKV1D-8A0A087WSZ0 117 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 LOC390937A0A1W2PQ73 354 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 PRR19A6NJB7 356 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 H3BQ15 152 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 TNFSF12O43508 249 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 BPNT1O95861 308 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 OPN1LWP04000 364 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 DANCRP0C864 163 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 PMELP40967 661 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 IL15RAQ13261 267 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 CHRFAM7AQ494W8 412 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 Q7L0L9 218 aa13.14□□□□□ -0.31
CLCN1-201ENST00000343257 REC114Q7Z4M0 266 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms