RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 CFHR5Q9BXR6 569 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 MOB1AQ9H8S9 216 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 EHFQ9NZC4 300 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 C14orf166Q9Y224 244 aaKnown RBP8.53□□□□□ -1.04
HOXA1-201ENST00000343060 NSG2Q9Y328 171 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 COL5A1P20908 1838 aaPredicted RBP8.53□□□□□ -1.04
HOXA1-201ENST00000343060 TMED7-TICAM2A0A0A6YYA0 188 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 CRYM-AS1A6NIL9 109 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 ALG1L2C9J202 215 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 FTCDNL1E5RQL4 147 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 GPR137BO60478 399 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 F10P00742 488 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 CTSDP07339 412 aaPredicted RBP8.53□□□□□ -1.04
HOXA1-201ENST00000343060 PGCP20142 388 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 OR3A2P47893 321 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 GPM6BQ13491 265 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 RUNX3Q13761 415 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 ERV3-1Q14264 604 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 HIKESHIQ53FT3 197 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 GPR157Q5UAW9 335 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 C1orf53Q5VUE5 145 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 GGNBP1Q5YKI7 109 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 FOXRED2Q8IWF2 684 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 ZNF610Q8N9Z0 462 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 OR10H5Q8NGA6 315 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 OR10S1Q8NGN2 331 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 PHOSPHO2Q8TCD6 241 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 BSCL2Q96G97 398 aaPredicted RBP8.53□□□□□ -1.04
HOXA1-201ENST00000343060 SMIM3Q9BZL3 60 aa8.53□□□□□ -1.04
HOXA1-201ENST00000343060 PARP12Q9H0J9 701 aaKnown RBP8.53□□□□□ -1.04
HOXA1-201ENST00000343060 ELOA3CA0A087WX78 387 aaPredicted RBP8.52□□□□□ -1.04
HOXA1-201ENST00000343060 APODP05090 189 aa8.52□□□□□ -1.04
HOXA1-201ENST00000343060 RPS10P46783 165 aaKnown RBP8.52□□□□□ -1.04
HOXA1-201ENST00000343060 OR3A4PP47883 348 aa8.52□□□□□ -1.04
HOXA1-201ENST00000343060 SNU13P55769 128 aaKnown RBP8.52□□□□□ -1.04
HOXA1-201ENST00000343060 CSNK2A1P68400 391 aaPredicted RBP8.52□□□□□ -1.04
HOXA1-201ENST00000343060 FMODQ06828 376 aa8.52□□□□□ -1.04
HOXA1-201ENST00000343060 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.52□□□□□ -1.04
HOXA1-201ENST00000343060 CSNK2A3Q8NEV1 391 aa8.52□□□□□ -1.04
HOXA1-201ENST00000343060 OR13D1Q8NGV5 346 aa8.52□□□□□ -1.04
HOXA1-201ENST00000343060 CD300LFQ8TDQ1 290 aa8.52□□□□□ -1.04
HOXA1-201ENST00000343060 PATE1Q8WXA2 126 aa8.52□□□□□ -1.04
HOXA1-201ENST00000343060 MRPL24Q96A35 216 aaKnown RBP8.52□□□□□ -1.04
HOXA1-201ENST00000343060 ADIPOR1Q96A54 375 aa8.52□□□□□ -1.04
HOXA1-201ENST00000343060 NTNG2Q96CW9 530 aa8.52□□□□□ -1.04
HOXA1-201ENST00000343060 SLAMF6Q96DU3 332 aa8.52□□□□□ -1.04
HOXA1-201ENST00000343060 DNAJA3Q96EY1 480 aa8.52□□□□□ -1.04
HOXA1-201ENST00000343060 CYYR1Q96J86 154 aa8.52□□□□□ -1.04
HOXA1-201ENST00000343060 BMFQ96LC9 184 aa8.52□□□□□ -1.04
HOXA1-201ENST00000343060 URM1Q9BTM9 101 aaKnown RBP8.52□□□□□ -1.04
HOXA1-201ENST00000343060 KLHL13Q9P2N7 655 aa8.52□□□□□ -1.04
HOXA1-201ENST00000343060 MYO7AQ13402 2215 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 IGKV1D-43A0A0B4J1Z2 117 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 TLCD2A6NGC4 264 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 ARGFXA6NJG6 315 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 C17orf105B2RV13 164 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 H0Y8X5 98 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 FKTNO75072 461 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 IFNA21P01568 189 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 HLA-DOBP13765 273 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 ZNF20P17024 532 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 CCL1P22362 96 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 GABRA4P48169 554 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 FHITP49789 147 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 PPA1Q15181 289 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 SOHLH1Q5JUK2 328 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 POMZP3Q6PJE2 187 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 KLHL24Q6TFL4 600 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 OOSP2Q86WS3 158 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 WDFY1Q8IWB7 410 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 HIST3H2BBQ8N257 126 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 ZNF321PQ8N8H1 164 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 SUMF2Q8NBJ7 301 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 PTPMT1Q8WUK0 201 aaPredicted RBP8.52□□□□□ -1.05
HOXA1-201ENST00000343060 SHDQ96IW2 340 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 ADOQ96SZ5 270 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 OR11A1Q9GZK7 315 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 C8orf33Q9H7E9 229 aaPredicted RBP8.52□□□□□ -1.05
HOXA1-201ENST00000343060 CENPMQ9NSP4 180 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 FBXO7Q9Y3I1 522 aa8.52□□□□□ -1.05
HOXA1-201ENST00000343060 PHF3Q92576 2039 aaKnown RBP8.52□□□□□ -1.05
HOXA1-201ENST00000343060 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.51□□□□□ -1.05
HOXA1-201ENST00000343060 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.51□□□□□ -1.05
HOXA1-201ENST00000343060 LINC01553A4QN01 128 aa8.51□□□□□ -1.05
HOXA1-201ENST00000343060 CXorf65A6NEN9 183 aa8.51□□□□□ -1.05
HOXA1-201ENST00000343060 SDCBPO00560 298 aaPredicted RBP8.51□□□□□ -1.05
HOXA1-201ENST00000343060 SLC31A2O15432 143 aa8.51□□□□□ -1.05
HOXA1-201ENST00000343060 AHSA1O95433 338 aa8.51□□□□□ -1.05
HOXA1-201ENST00000343060 LY86O95711 162 aa8.51□□□□□ -1.05
HOXA1-201ENST00000343060 MBPP02686 304 aaPredicted RBP8.51□□□□□ -1.05
HOXA1-201ENST00000343060 IGKV3-11P04433 115 aa8.51□□□□□ -1.05
HOXA1-201ENST00000343060 BTF3P20290 206 aaKnown RBP8.51□□□□□ -1.05
HOXA1-201ENST00000343060 PPP1CCP36873 323 aaKnown RBP8.51□□□□□ -1.05
HOXA1-201ENST00000343060 APOBEC1P41238 236 aaKnown RBP8.51□□□□□ -1.05
HOXA1-201ENST00000343060 ALDH3B1P43353 468 aa8.51□□□□□ -1.05
HOXA1-201ENST00000343060 MNX1P50219 401 aaPredicted RBP8.51□□□□□ -1.05
HOXA1-201ENST00000343060 DAP3P51398 398 aaKnown RBP8.51□□□□□ -1.05
HOXA1-201ENST00000343060 NDUFA6P56556 154 aa8.51□□□□□ -1.05
HOXA1-201ENST00000343060 ACY1Q03154 408 aa8.51□□□□□ -1.05
HOXA1-201ENST00000343060 ARFRP1Q13795 201 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms