RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 RAP1BP61224 184 aa11.52□□□□□ -0.56
COL18A1-201ENST00000342220 RAP1AP62834 184 aa11.52□□□□□ -0.56
COL18A1-201ENST00000342220 WDR38Q5JTN6 314 aa11.52□□□□□ -0.56
COL18A1-201ENST00000342220 OLFML2AQ68BL7 652 aa11.52□□□□□ -0.56
COL18A1-201ENST00000342220 ZNF227Q86WZ6 799 aa11.52□□□□□ -0.56
COL18A1-201ENST00000342220 PUSL1Q8N0Z8 303 aaKnown RBP11.52□□□□□ -0.56
COL18A1-201ENST00000342220 EXD3Q8N9H8 876 aa11.52□□□□□ -0.56
COL18A1-201ENST00000342220 OR5D18Q8NGL1 313 aa11.52□□□□□ -0.56
COL18A1-201ENST00000342220 AKR7LQ8NHP1 331 aa11.52□□□□□ -0.56
COL18A1-201ENST00000342220 RAB40AQ8WXH6 277 aa11.52□□□□□ -0.56
COL18A1-201ENST00000342220 TMEM68Q96MH6 324 aa11.52□□□□□ -0.56
COL18A1-201ENST00000342220 OXGR1Q96P68 337 aa11.52□□□□□ -0.56
COL18A1-201ENST00000342220 FAM173AQ9BQD7 235 aa11.52□□□□□ -0.56
COL18A1-201ENST00000342220 ZMAT3Q9HA38 289 aaKnown RBP11.52□□□□□ -0.56
COL18A1-201ENST00000342220 TMEM14AQ9Y6G1 99 aa11.52□□□□□ -0.56
COL18A1-201ENST00000342220 ACOT7O00154 380 aa11.52□□□□□ -0.57
COL18A1-201ENST00000342220 FBP1P09467 338 aa11.52□□□□□ -0.57
COL18A1-201ENST00000342220 CNR1P21554 472 aa11.52□□□□□ -0.57
COL18A1-201ENST00000342220 RAC1P63000 192 aa11.52□□□□□ -0.57
COL18A1-201ENST00000342220 SLC10A1Q14973 349 aa11.52□□□□□ -0.57
COL18A1-201ENST00000342220 ABHD12BQ7Z5M8 362 aaPredicted RBP11.52□□□□□ -0.57
COL18A1-201ENST00000342220 LRRTM1Q86UE6 522 aa11.52□□□□□ -0.57
COL18A1-201ENST00000342220 GLB1L2Q8IW92 636 aa11.52□□□□□ -0.57
COL18A1-201ENST00000342220 OR2G2Q8NGZ5 317 aa11.52□□□□□ -0.57
COL18A1-201ENST00000342220 THAP6Q8TBB0 222 aa11.52□□□□□ -0.57
COL18A1-201ENST00000342220 SLC25A43Q8WUT9 341 aaPredicted RBP11.52□□□□□ -0.57
COL18A1-201ENST00000342220 GPX7Q96SL4 187 aaPredicted RBP11.52□□□□□ -0.57
COL18A1-201ENST00000342220 CGGBP1Q9UFW8 167 aaPredicted RBP11.52□□□□□ -0.57
COL18A1-201ENST00000342220 MOKQ9UQ07 419 aa11.52□□□□□ -0.57
COL18A1-201ENST00000342220 ADAMTS20P59510 1910 aa11.52□□□□□ -0.57
COL18A1-201ENST00000342220 MEIS3P1A6NDR6 274 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 TM4SF5O14894 197 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 ZNF208O43345 1280 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 AQP8O94778 261 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 SYNGR4O95473 234 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 GUSBP08236 651 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 SRD5A2P31213 254 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 GK2Q14410 553 aaPredicted RBP11.51□□□□□ -0.57
COL18A1-201ENST00000342220 OR10K2Q6IF99 312 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 OR9K2Q8NGE7 335 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 SLAMF6Q96DU3 332 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 RHOVQ96L33 236 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 HDGFL3Q9Y3E1 203 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 TMEM82A0PJX8 343 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 KLRC4-KLRK1H3BQV0 150 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 PYCARD-AS1I3L0S3 204 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 TRAF3IP2O43734 574 aaPredicted RBP11.51□□□□□ -0.57
COL18A1-201ENST00000342220 CREBL2O60519 120 aaPredicted RBP11.51□□□□□ -0.57
COL18A1-201ENST00000342220 MRPL33O75394 65 aaKnown RBP11.51□□□□□ -0.57
COL18A1-201ENST00000342220 ABHD16AO95870 558 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 SP1P08047 785 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 NDUFB7P17568 137 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 PCP4P48539 62 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 PHYHD1Q5SRE7 291 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 ZNF100Q8IYN0 542 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 SPAG16Q8N0X2 631 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 OR13C3Q8NGS6 347 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 OR10K1Q8NGX5 313 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 RXFP4Q8TDU9 374 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 SOX7Q9BT81 388 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 POTEKPQ9BYX7 375 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 UPB1Q9UBR1 384 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 PLSCR5A0PG75 271 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 ZNF729A6NN14 1252 aaPredicted RBP11.51□□□□□ -0.57
COL18A1-201ENST00000342220 LIPCP11150 499 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 CD79AP11912 226 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 GUCA2BQ16661 112 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 TUSC5Q8IXB3 177 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 SPICQ8N5J4 248 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 OR2V1Q8NHB1 315 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 ZNF519Q8TB69 540 aa11.51□□□□□ -0.57
COL18A1-201ENST00000342220 FXYD6-FXYD2A0A087WZ82 144 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 TRBV5-5A0A0J9YX44 114 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 GLSO94925 669 aaPredicted RBP11.5□□□□□ -0.57
COL18A1-201ENST00000342220 NDUFB6O95139 128 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 VSIG10L2P0DP72 767 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 S100A11P31949 105 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 EFNB2P52799 333 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 SLC25A1P53007 311 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 RRADP55042 308 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 UBE2MP61081 183 aaKnown RBP11.5□□□□□ -0.57
COL18A1-201ENST00000342220 PCGF3Q3KNV8 242 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 EMC4Q5J8M3 183 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 ZNF626Q68DY1 528 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 CDC20BQ86Y33 519 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 FADS6Q8N9I5 356 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 PXT1Q8NFP0 134 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 FXYD6Q9H0Q3 95 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 DHDHQ9UQ10 334 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 IGLV1-36A0A0B4J1U3 117 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 MCRIP1C9JLW8 97 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 TERTO14746 1132 aaKnown RBP11.5□□□□□ -0.57
COL18A1-201ENST00000342220 ONECUT2O95948 504 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 GIPP09681 153 aaPredicted RBP11.5□□□□□ -0.57
COL18A1-201ENST00000342220 CEACAM1P13688 526 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 GUCA2AQ02747 115 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 C2orf68Q2NKX9 166 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 CEACAM16Q2WEN9 425 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 TMEM17Q86X19 198 aa11.5□□□□□ -0.57
COL18A1-201ENST00000342220 NOXO1Q8NFA2 376 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms