RNA–Protein interactions for RNA: ENST00000339859.8

USP54-201, Transcript of ubiquitin specific peptidase 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP54, Length 6,247 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-201ENST00000339859 CISD1Q9NZ45 108 aaKnown RBP8.95□□□□□ -0.98
USP54-201ENST00000339859 GPR6P46095 362 aaPredicted RBP8.95□□□□□ -0.98
USP54-201ENST00000339859 SPCS2Q15005 226 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 RBMS2Q15434 407 aaKnown RBP8.95□□□□□ -0.98
USP54-201ENST00000339859 APOOLQ6UXV4 268 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 UQCC2Q9BRT2 126 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 SRXN1Q9BYN0 137 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 ASF1BQ9NVP2 202 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 HAO2Q9NYQ3 351 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 SEMA5BQ9P283 1151 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 CHST2Q9Y4C5 530 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 COL4A4P53420 1690 aaPredicted RBP8.95□□□□□ -0.98
USP54-201ENST00000339859 TRAV1-2A0A0B4J238 106 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 ARPC1BO15143 372 aaKnown RBP8.95□□□□□ -0.98
USP54-201ENST00000339859 ADAM20O43506 726 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 UPK1BO75841 260 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 MGMTP16455 207 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 PTBP1P26599 531 aaKnown RBP eCLIP8.95□□□□□ -0.98
USP54-201ENST00000339859 ERP29P30040 261 aaKnown RBP8.95□□□□□ -0.98
USP54-201ENST00000339859 GZMMP51124 257 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 GNB1P62873 340 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 RNLSQ5VYX0 342 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 TMEM45BQ96B21 275 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 S100PBPQ96BU1 408 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 FKBP14Q9NWM8 211 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 LPAR3Q9UBY5 353 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 PTPRDP23468 1912 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 CENPVL1A0A0U1RR11 272 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 UPK3AO75631 287 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 PTTG1O95997 202 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 CEACAM3P40198 252 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 PNLIPRP3Q17RR3 467 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 UTS2BQ765I0 119 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 OR13F1Q8NGS4 319 aa8.95□□□□□ -0.98
USP54-201ENST00000339859 NUDT16L1Q9BRJ7 211 aaKnown RBP8.95□□□□□ -0.98
USP54-201ENST00000339859 F5H5P2 479 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 RP2O75695 350 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 FABP1P07148 127 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 CAV2P51636 162 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 ZXDCQ2QGD7 858 aaPredicted RBP8.94□□□□□ -0.98
USP54-201ENST00000339859 CD276Q5ZPR3 534 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 ZNF519Q8TB69 540 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 TAAR6Q96RI8 345 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 IFNA7P01567 189 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 TNFSF8P32971 234 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 CDH24Q86UP0 819 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 MOGAT3Q86VF5 341 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 TUBD1Q9UJT1 453 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 SLC22A5O76082 557 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 CLDN14O95500 239 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 PNPP00491 289 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 FAM27BQ5VT28 67 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 ADAM5Q6NVV9 412 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 OR8B12Q8NGG6 310 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 NLKQ9UBE8 527 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 PGA4P0DJD7 388 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 PGA3P0DJD8 388 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 RPS16P62249 146 aaKnown RBP8.94□□□□□ -0.98
USP54-201ENST00000339859 FUT5Q11128 374 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 ETFDHQ16134 617 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 FADS6Q8N9I5 356 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 SLC25A46Q96AG3 418 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 SPACA5Q96QH8 159 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 ZNF665Q9H7R5 613 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 SLC23A1Q9UHI7 598 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 TMEFF2Q9UIK5 374 aaPredicted RBP8.94□□□□□ -0.98
USP54-201ENST00000339859 TINAGQ9UJW2 476 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 DSPPQ9NZW4 1301 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 ARPC4-TTLL3A0A0A6YYG9 625 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 FFAR1O14842 300 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 GDNFP39905 211 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 STEAP1BQ6NZ63 245 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 IDO2Q6ZQW0 420 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 H2BFWTQ7Z2G1 175 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 OR13C5Q8NGS8 318 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 OR10R2Q8NGX6 335 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 GNB4Q9HAV0 340 aa8.94□□□□□ -0.98
USP54-201ENST00000339859 ADRA2AP08913 450 aa8.93□□□□□ -0.98
USP54-201ENST00000339859 IL11P20809 199 aa8.93□□□□□ -0.98
USP54-201ENST00000339859 NFYAP23511 347 aaPredicted RBP8.93□□□□□ -0.98
USP54-201ENST00000339859 C2orf76Q3KRA6 126 aa8.93□□□□□ -0.98
USP54-201ENST00000339859 WDSUB1Q8N9V3 476 aa8.93□□□□□ -0.98
USP54-201ENST00000339859 TMEM68Q96MH6 324 aa8.93□□□□□ -0.98
USP54-201ENST00000339859 ZDHHC8Q9ULC8 765 aa8.93□□□□□ -0.98
USP54-201ENST00000339859 TMEM82A0PJX8 343 aa8.93□□□□□ -0.98
USP54-201ENST00000339859 SDCBPO00560 298 aaPredicted RBP8.93□□□□□ -0.98
USP54-201ENST00000339859 ZNF708P17019 499 aa8.93□□□□□ -0.98
USP54-201ENST00000339859 FUT3P21217 361 aa8.93□□□□□ -0.98
USP54-201ENST00000339859 CDONQ4KMG0 1287 aa8.93□□□□□ -0.98
USP54-201ENST00000339859 RIPPLY2Q5TAB7 128 aa8.93□□□□□ -0.98
USP54-201ENST00000339859 SPNS3Q6ZMD2 512 aa8.93□□□□□ -0.98
USP54-201ENST00000339859 MOB3BQ86TA1 216 aa8.93□□□□□ -0.98
USP54-201ENST00000339859 AKR1E2Q96JD6 320 aa8.93□□□□□ -0.98
USP54-201ENST00000339859 NPTNQ9Y639 398 aa8.93□□□□□ -0.98
USP54-201ENST00000339859 TRIM64CA6NLI5 447 aa8.93□□□□□ -0.98
USP54-201ENST00000339859 KLF7O75840 302 aaPredicted RBP8.93□□□□□ -0.98
USP54-201ENST00000339859 OR4A8P0C604 315 aa8.93□□□□□ -0.98
USP54-201ENST00000339859 GABRA4P48169 554 aa8.93□□□□□ -0.98
USP54-201ENST00000339859 PDLIM4P50479 330 aa8.93□□□□□ -0.98
USP54-201ENST00000339859 UCP2P55851 309 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms