RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 H3F3CQ6NXT2 135 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 BAIAP2L2Q6UXY1 529 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 SLC22A24Q8N4F4 322 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 MEIOBQ8N635 442 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 ADAMTS17Q8TE56 1095 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 ADGRG7Q96K78 797 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 WNT5BQ9H1J7 359 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 ZNF629Q9UEG4 869 aaPredicted RBP11□□□□□ -0.65
LIMK1-201ENST00000336180 HSPB2A8KAH6 182 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 ZNF587BE7ETH6 402 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 CCSO14618 274 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 TSC22D1Q15714 1073 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 HSPB2Q16082 182 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 CYB5R2Q6BCY4 276 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 OR14K1Q8NGZ2 314 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 TNFAIP8L1Q8WVP5 186 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 FAM173AQ9BQD7 235 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 EIF3KQ9UBQ5 218 aaKnown RBP11□□□□□ -0.65
LIMK1-201ENST00000336180 APC2O95996 2303 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 BET1O15155 118 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 MRPL33O75394 65 aaKnown RBP10.99□□□□□ -0.65
LIMK1-201ENST00000336180 RAD51DO75771 328 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 CD79AP11912 226 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 FSTP19883 344 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 BTG1P62324 171 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 TNK1Q13470 666 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 NUFIP2Q7Z417 695 aaKnown RBP10.99□□□□□ -0.65
LIMK1-201ENST00000336180 LOXL4Q96JB6 756 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 CDC6Q99741 560 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 SLC6A7Q99884 636 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 HDHD3Q9BSH5 251 aaPredicted RBP10.99□□□□□ -0.65
LIMK1-201ENST00000336180 ST6GALNAC5Q9BVH7 336 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 C1QTNF6Q9BXI9 259 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 CRIM1Q9NZV1 1036 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 GJE1A6NN92 205 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 SDCBPO00560 298 aaPredicted RBP10.99□□□□□ -0.65
LIMK1-201ENST00000336180 TERTO14746 1132 aaKnown RBP10.99□□□□□ -0.65
LIMK1-201ENST00000336180 GALR2O43603 387 aaPredicted RBP10.99□□□□□ -0.65
LIMK1-201ENST00000336180 LHX2P50458 406 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 AP3S2P59780 193 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 ARF1P84077 181 aaKnown RBP10.99□□□□□ -0.65
LIMK1-201ENST00000336180 NLRC3Q7RTR2 1065 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 ZNF431Q8TF32 576 aaPredicted RBP10.99□□□□□ -0.65
LIMK1-201ENST00000336180 ARHGAP5-AS1Q96IT6 56 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 TMEM38BQ9NVV0 291 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 ACACAQ13085 2346 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 KIAA1549Q9HCM3 1950 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 C7orf66A4D0T2 115 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 VAMP5O95183 116 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 HTR3BO95264 441 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 ECDO95905 644 aaPredicted RBP10.99□□□□□ -0.65
LIMK1-201ENST00000336180 CYB5AP00167 134 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 CYC1P08574 325 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 EDN3P14138 238 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 BAMBIQ13145 260 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 KISS1Q15726 138 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 PLAC9Q5JTB6 97 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 C5orf24Q7Z6I8 188 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 CPEB3Q8NE35 698 aaKnown RBP10.99□□□□□ -0.65
LIMK1-201ENST00000336180 OR5M9Q8NGP3 310 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 POFUT1Q9H488 388 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 GPR35Q9HC97 309 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 SLC23A1Q9UHI7 598 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 PRSS50Q9UI38 385 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 RELNP78509 3460 aa10.99□□□□□ -0.65
LIMK1-201ENST00000336180 ANKRD11Q6UB99 2663 aaPredicted RBP10.98□□□□□ -0.65
LIMK1-201ENST00000336180 TGM6O95932 706 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 HRH1P35367 487 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 GMFBP60983 142 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 HLXQ14774 488 aaPredicted RBP10.98□□□□□ -0.65
LIMK1-201ENST00000336180 LRRC37A5PQ49AS3 106 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 PABPC1L2AQ5JQF8 200 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 DCAF12L2Q5VW00 463 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 HDDC2Q7Z4H3 204 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 BPIFB2Q8N4F0 458 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 GPX8Q8TED1 209 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 SNAPC3Q92966 411 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 GPR87Q9BY21 358 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 KCNK7Q9Y2U2 307 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 TMEM238LA0A1B0GVL6 79 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 SP1P08047 785 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 TMEM225BP0DP42 221 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 ANXA3P12429 323 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 CLDN18P56856 261 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 ESCO2Q56NI9 601 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 C11orf88Q6PI97 169 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 LYPD6Q86Y78 171 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 ZNF584Q8IVC4 421 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 MUC20Q8N307 709 aaPredicted RBP10.98□□□□□ -0.65
LIMK1-201ENST00000336180 FDCSPQ8NFU4 85 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 OR51T1Q8NGJ9 327 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 CASTOR1Q8WTX7 329 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 REEP6Q96HR9 211 aa10.98□□□□□ -0.65
LIMK1-201ENST00000336180 MEGF11A6BM72 1044 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 ZNF736B4DX44 427 aaPredicted RBP10.97□□□□□ -0.65
LIMK1-201ENST00000336180 GOSR2O14653 212 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 LDLRAD4O15165 306 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 AKAIN1P0CW23 69 aa10.97□□□□□ -0.65
LIMK1-201ENST00000336180 GRB2P62993 217 aaKnown RBP10.97□□□□□ -0.65
LIMK1-201ENST00000336180 CXADRP78310 365 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms