RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 TRBV5-5A0A0J9YX44 114 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 FAM221AA4D161 298 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 TMEM212A6NML5 194 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 CTAG2O75638 210 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 CCNKO75909 580 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 RAD52P43351 418 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 DAZAP2Q15038 168 aaPredicted RBP14.11□□□□□ -0.15
SHOX-201ENST00000334060 CEP78Q5JTW2 689 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 RSBN1Q5VWQ0 802 aaPredicted RBP14.11□□□□□ -0.15
SHOX-201ENST00000334060 FBXW12Q6X9E4 464 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 NUP37Q8NFH4 326 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 TSEN15Q8WW01 171 aaKnown RBP14.11□□□□□ -0.15
SHOX-201ENST00000334060 SPACA5Q96QH8 159 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 MOB1AQ9H8S9 216 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 ISYNA1Q9NPH2 558 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 V9GYS6 101 aa14.11□□□□□ -0.15
SHOX-201ENST00000334060 LOC100506127A0A0U1RQW1 187 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 ZSCAN5BA6NJL1 495 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 CD300LBA8K4G0 201 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 GABRPO00591 440 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 ISG15P05161 165 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 NAT2P11245 290 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 TAS2R43P59537 309 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 OR8B8Q15620 311 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 ZNF404Q494X3 552 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 ACSM3Q53FZ2 586 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 SIGIRRQ6IA17 410 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 C22orf42Q6IC83 251 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 USP43Q70EL4 1123 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 POC5Q8NA72 575 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 OR13C3Q8NGS6 347 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 MCFD2Q8NI22 146 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 SUN5Q8TC36 379 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 TMEM106AQ96A25 262 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 BCL2L14Q9BZR8 327 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 SLIRPQ9GZT3 109 aaKnown RBP14.1□□□□□ -0.15
SHOX-201ENST00000334060 UBTD1Q9HAC8 227 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 NOX4Q9NPH5 578 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 GPR173Q9NS66 373 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 TAS2R4Q9NYW5 299 aa14.1□□□□□ -0.15
SHOX-201ENST00000334060 PURGQ9UJV8 347 aaKnown RBP14.1□□□□□ -0.15
SHOX-201ENST00000334060 RAI1Q7Z5J4 1906 aaPredicted RBP14.09□□□□□ -0.15
SHOX-201ENST00000334060 IGKV1-9A0A0C4DH69 117 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 A0A1B0GVI7 797 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 CENPXA8MT69 81 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 MLNRO43193 412 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 XRCC2O43543 280 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 CD8AP01732 235 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 UBCP0CG48 685 aaKnown RBP14.09□□□□□ -0.15
SHOX-201ENST00000334060 COX6B1P14854 86 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 ZNF250P15622 560 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 ACHEP22303 614 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 S100A5P33763 92 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 NCS1P62166 190 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 CDK10Q15131 360 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 TGIF2LYQ8IUE0 185 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 MRPL24Q96A35 216 aaKnown RBP14.09□□□□□ -0.15
SHOX-201ENST00000334060 DERL3Q96Q80 235 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 CCDC32Q9BV29 185 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 COMMD4Q9H0A8 199 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 CCDC59Q9P031 241 aaKnown RBP14.09□□□□□ -0.15
SHOX-201ENST00000334060 HHLA2Q9UM44 414 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 PEX16Q9Y5Y5 336 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 UNC79Q9P2D8 2635 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 GGT3PA6NGU5 568 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 DHRS3O75911 302 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 APOC1P02654 83 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 CA6P23280 308 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 GABRA5P31644 462 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 DDOSTP39656 456 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 ETV6P41212 452 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 UBE2V2Q15819 145 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 CEACAM19Q7Z692 300 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 NR2C2APQ86WQ0 139 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 SPERTQ8NA61 448 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 DNAAF1Q8NEP3 725 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 SYNPRQ8TBG9 265 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 HAVCR1Q96D42 359 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 NXF2Q9GZY0 626 aaKnown RBP14.09□□□□□ -0.15
SHOX-201ENST00000334060 CLEC4MQ9H2X3 399 aaPredicted RBP14.09□□□□□ -0.15
SHOX-201ENST00000334060 EXOSC4Q9NPD3 245 aaKnown RBP14.09□□□□□ -0.15
SHOX-201ENST00000334060 ZNF275Q9NSD4 429 aaPredicted RBP14.09□□□□□ -0.15
SHOX-201ENST00000334060 KCNN3Q9UGI6 736 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 ARFGEF3Q5TH69 2177 aa14.09□□□□□ -0.15
SHOX-201ENST00000334060 USF3Q68DE3 2245 aa14.08□□□□□ -0.15
SHOX-201ENST00000334060 IGLV3-9A0A075B6K5 115 aa14.08□□□□□ -0.16
SHOX-201ENST00000334060 ZNF850A8MQ14 1090 aa14.08□□□□□ -0.16
SHOX-201ENST00000334060 CLEC2LP0C7M8 214 aa14.08□□□□□ -0.16
SHOX-201ENST00000334060 RCVRNP35243 200 aa14.08□□□□□ -0.16
SHOX-201ENST00000334060 MMP15P51511 669 aa14.08□□□□□ -0.16
SHOX-201ENST00000334060 MALLQ13021 153 aa14.08□□□□□ -0.16
SHOX-201ENST00000334060 ZMAT1Q5H9K5 638 aa14.08□□□□□ -0.16
SHOX-201ENST00000334060 MBNL2Q5VZF2 373 aaKnown RBP14.08□□□□□ -0.16
SHOX-201ENST00000334060 CRIP3Q6Q6R5 217 aa14.08□□□□□ -0.16
SHOX-201ENST00000334060 DOK3Q7L591 496 aa14.08□□□□□ -0.16
SHOX-201ENST00000334060 OR13C9Q8NGT0 318 aa14.08□□□□□ -0.16
SHOX-201ENST00000334060 HPSE2Q8WWQ2 592 aa14.08□□□□□ -0.16
SHOX-201ENST00000334060 GFI1Q99684 422 aa14.08□□□□□ -0.16
SHOX-201ENST00000334060 TAAR3PQ9P1P4 343 aa14.08□□□□□ -0.16
SHOX-201ENST00000334060 ZNF879B4DU55 563 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms