RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 RBPMSQ93062 196 aaKnown RBP12.75□□□□□ -0.37
TPM3-206ENST00000330188 TCEAL3Q969E4 200 aa12.75□□□□□ -0.37
TPM3-206ENST00000330188 C10orf35Q96D05 121 aa12.75□□□□□ -0.37
TPM3-206ENST00000330188 SEC22AQ96IW7 307 aa12.75□□□□□ -0.37
TPM3-206ENST00000330188 CXorf58Q96LI9 332 aa12.75□□□□□ -0.37
TPM3-206ENST00000330188 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.75□□□□□ -0.37
TPM3-206ENST00000330188 PCDHGA1Q9Y5H4 931 aa12.75□□□□□ -0.37
TPM3-206ENST00000330188 COL6A3P12111 3177 aa12.75□□□□□ -0.37
TPM3-206ENST00000330188 CCDC187A0A096LP49 1063 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 ZNF716A6NP11 495 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 FCGR2AP12318 317 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 MGMTP16455 207 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 VAMP1P23763 118 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 AVPR2P30518 371 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 CBX5P45973 191 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 SSPNQ14714 243 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 C11orf87Q6NUJ2 197 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 MYO7BQ6PIF6 2116 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 GPR137CQ8N3F9 429 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 ARRDC1Q8N5I2 433 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 CCDC54Q8NEL0 328 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 OR10K1Q8NGX5 313 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 CASTOR1Q8WTX7 329 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 HAS2Q92819 552 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 SGK3Q96BR1 496 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 ADGRG7Q96K78 797 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 MED9Q9NWA0 146 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 TMA7Q9Y2S6 64 aaKnown RBP12.74□□□□□ -0.37
TPM3-206ENST00000330188 POM121CA8CG34 1229 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 SYNGR3O43761 229 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 CXCL13O43927 109 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 MTRF1O75570 445 aaKnown RBP12.74□□□□□ -0.37
TPM3-206ENST00000330188 DUS4LO95620 317 aaKnown RBP12.74□□□□□ -0.37
TPM3-206ENST00000330188 SERPINA2P20848 420 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 TAS2R31P59538 309 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 ARFRP1Q13795 201 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 RAB35Q15286 201 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 FAM209AQ5JX71 171 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 WIPI1Q5MNZ9 446 aaPredicted RBP12.74□□□□□ -0.37
TPM3-206ENST00000330188 ACER2Q5QJU3 275 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 SLC16A14Q7RTX9 510 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 LRRC20Q8TCA0 184 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 RHBDD1Q8TEB9 315 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 PPP1R1CQ8WVI7 109 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 ROBO4Q8WZ75 1007 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 PIGTQ969N2 578 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 TM2D1Q9BX74 207 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 CRLF2Q9HC73 371 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 DEPPQ9NTK1 212 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 COMMD9Q9P000 198 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 TNFSF18Q9UNG2 199 aa12.74□□□□□ -0.37
TPM3-206ENST00000330188 A0A0D9SG52 128 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 DBX1A6NMT0 343 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 CEACAM18A8MTB9 384 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 SGCEO43556 437 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 CST2P09228 141 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 STARP49675 285 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 ATP1B3P54709 279 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 HGFACQ04756 655 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 LRRC37A5PQ49AS3 106 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 ABLIM2Q6H8Q1 611 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 DBX2Q6ZNG2 339 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 RFPL4BQ6ZWI9 263 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 KCNRGQ8N5I3 272 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 DEFB123Q8N688 67 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 OR52H1Q8NGJ2 320 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 PECRQ9BY49 303 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 NARFLQ9H6Q4 476 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 TMEM38BQ9NVV0 291 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 SDHAF2Q9NX18 166 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 GPR132Q9UNW8 380 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 RTTNQ86VV8 2226 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 MFSD2BA6NFX1 497 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 SPDEFO95238 335 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 HPNP05981 417 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 BLVRBP30043 206 aaPredicted RBP12.73□□□□□ -0.37
TPM3-206ENST00000330188 NPY4RP50391 375 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 ZNF345Q14585 488 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 ZNF774Q6NX45 483 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 DRAM2Q6UX65 266 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 KCTD9Q7L273 389 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 TMEM105Q8N8V8 129 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 OR5M9Q8NGP3 310 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 OR5H2Q8NGV7 314 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 OR10D3Q8NH80 312 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 OR2V1Q8NHB1 315 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 CPT1CQ8TCG5 803 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 TMEM230Q96A57 120 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 DMRTA2Q96SC8 542 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 C5orf66Q9H5L9 145 aa12.73□□□□□ -0.37
TPM3-206ENST00000330188 TECTAO75443 2155 aa12.72□□□□□ -0.37
TPM3-206ENST00000330188 PINLYPA6NC86 204 aa12.72□□□□□ -0.37
TPM3-206ENST00000330188 FAM25EA8MYX2 175 aa12.72□□□□□ -0.37
TPM3-206ENST00000330188 RLN2P04090 185 aa12.72□□□□□ -0.37
TPM3-206ENST00000330188 SERPINA7P05543 415 aa12.72□□□□□ -0.37
TPM3-206ENST00000330188 AMY2BP19961 511 aa12.72□□□□□ -0.37
TPM3-206ENST00000330188 ACKR3P25106 362 aa12.72□□□□□ -0.37
TPM3-206ENST00000330188 CLDN15P56746 228 aa12.72□□□□□ -0.37
TPM3-206ENST00000330188 UBA52P62987 128 aaKnown RBP12.72□□□□□ -0.37
TPM3-206ENST00000330188 ZNF528Q3MIS6 628 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms