RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 IAH1Q2TAA2 248 aaPredicted RBP14.16□□□□□ -0.14
SYNM-201ENST00000328642 HACD4Q5VWC8 232 aa14.16□□□□□ -0.14
SYNM-201ENST00000328642 CD200R1LQ6Q8B3 271 aa14.16□□□□□ -0.14
SYNM-201ENST00000328642 CCDC28AQ8IWP9 274 aa14.16□□□□□ -0.14
SYNM-201ENST00000328642 ZSCAN4Q8NAM6 433 aaPredicted RBP14.16□□□□□ -0.14
SYNM-201ENST00000328642 OR56B2PQ8NGI1 322 aa14.16□□□□□ -0.14
SYNM-201ENST00000328642 ZNF837Q96EG3 531 aaPredicted RBP14.16□□□□□ -0.14
SYNM-201ENST00000328642 ZNF71Q9NQZ8 489 aaPredicted RBP14.16□□□□□ -0.14
SYNM-201ENST00000328642 TRAPPC2LQ9UL33 140 aa14.16□□□□□ -0.14
SYNM-201ENST00000328642 KLF13Q9Y2Y9 288 aaPredicted RBP14.16□□□□□ -0.14
SYNM-201ENST00000328642 KCNAB3O43448 404 aa14.16□□□□□ -0.14
SYNM-201ENST00000328642 TIMM8AO60220 97 aaPredicted RBP14.16□□□□□ -0.14
SYNM-201ENST00000328642 SLC34A2O95436 690 aa14.16□□□□□ -0.14
SYNM-201ENST00000328642 HLA-DQB1P01920 261 aa14.16□□□□□ -0.14
SYNM-201ENST00000328642 TTRP02766 147 aa14.16□□□□□ -0.14
SYNM-201ENST00000328642 GABRA4P48169 554 aa14.16□□□□□ -0.14
SYNM-201ENST00000328642 ACSM1Q08AH1 577 aa14.16□□□□□ -0.14
SYNM-201ENST00000328642 SLC22A25Q6T423 547 aa14.16□□□□□ -0.14
SYNM-201ENST00000328642 TMEM104Q8NE00 496 aa14.16□□□□□ -0.14
SYNM-201ENST00000328642 FOXJ2Q9P0K8 574 aa14.16□□□□□ -0.14
SYNM-201ENST00000328642 MTFP1Q9UDX5 166 aa14.16□□□□□ -0.14
SYNM-201ENST00000328642 ZNF175Q9Y473 711 aa14.16□□□□□ -0.14
SYNM-201ENST00000328642 TMEM265A0A087WTH1 108 aa14.16□□□□□ -0.14
SYNM-201ENST00000328642 IGLV1-36A0A0B4J1U3 117 aa14.16□□□□□ -0.14
SYNM-201ENST00000328642 MCRIP1C9JLW8 97 aa14.16□□□□□ -0.14
SYNM-201ENST00000328642 PHF1O43189 567 aaPredicted RBP14.16□□□□□ -0.14
SYNM-201ENST00000328642 PCOLCEQ15113 449 aa14.16□□□□□ -0.14
SYNM-201ENST00000328642 DCAF10Q5QP82 559 aa14.16□□□□□ -0.14
SYNM-201ENST00000328642 MAP6Q96JE9 813 aa14.16□□□□□ -0.14
SYNM-201ENST00000328642 VRK1Q99986 396 aaPredicted RBP14.16□□□□□ -0.14
SYNM-201ENST00000328642 TRGV5A0A0B4J1U4 118 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 SCGNO76038 276 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 CELA3AP09093 270 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 PRKACBP22694 351 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 PTBP1P26599 531 aaKnown RBP eCLIP14.15□□□□□ -0.14
SYNM-201ENST00000328642 SOX8P57073 446 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 GNMTQ14749 295 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 TSPO2Q5TGU0 170 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 CCDC36Q8IYA8 594 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 WDSUB1Q8N9V3 476 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 OR6X1Q8NH79 312 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 CLDN23Q96B33 292 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 FAM173AQ9BQD7 235 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.15□□□□□ -0.14
SYNM-201ENST00000328642 IGHV1-45A0A0A0MS14 117 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 SLC22A20A6NK97 555 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 SERPINE2P07093 398 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 CHRM2P08172 466 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 AGTR1P30556 359 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 SERPINF1P36955 418 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 GAS1P54826 345 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 GSG1Q2KHT4 349 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 WDR5BQ86VZ2 330 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 SLC25A38Q96DW6 304 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 MS4A3Q96HJ5 214 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 SUCNR1Q9BXA5 334 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 SLCO5A1Q9H2Y9 848 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 ATRXP46100 2492 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 SIRPB1O00241 398 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 RAC3P60763 192 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 MC2RQ01718 297 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 FOXC1Q12948 553 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 ZNF766Q5HY98 468 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 CATSPERDQ86XM0 798 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 SYT3Q9BQG1 590 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 OTOGLQ3ZCN5 2332 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 MED13Q9UHV7 2174 aa14.15□□□□□ -0.14
SYNM-201ENST00000328642 M0R036 132 aa14.15□□□□□ -0.15
SYNM-201ENST00000328642 HSD17B6O14756 317 aa14.15□□□□□ -0.15
SYNM-201ENST00000328642 SRD5A2P31213 254 aa14.15□□□□□ -0.15
SYNM-201ENST00000328642 CREB3L2Q70SY1 520 aa14.15□□□□□ -0.15
SYNM-201ENST00000328642 TMEM217Q8N7C4 229 aa14.15□□□□□ -0.15
SYNM-201ENST00000328642 RRNAD1Q96FB5 475 aaKnown RBP14.15□□□□□ -0.15
SYNM-201ENST00000328642 HDHD3Q9BSH5 251 aaPredicted RBP14.15□□□□□ -0.15
SYNM-201ENST00000328642 ZNF426Q9BUY5 554 aa14.15□□□□□ -0.15
SYNM-201ENST00000328642 NPAP1Q9NZP6 1156 aa14.15□□□□□ -0.15
SYNM-201ENST00000328642 NOTCH2Q04721 2471 aa14.14□□□□□ -0.15
SYNM-201ENST00000328642 PLXNB3Q9ULL4 1909 aa14.14□□□□□ -0.15
SYNM-201ENST00000328642 IGHV3-13P01766 116 aa14.14□□□□□ -0.15
SYNM-201ENST00000328642 IGHV3-7P01780 117 aa14.14□□□□□ -0.15
SYNM-201ENST00000328642 TK1P04183 234 aa14.14□□□□□ -0.15
SYNM-201ENST00000328642 PVALBP20472 110 aaPredicted RBP14.14□□□□□ -0.15
SYNM-201ENST00000328642 OR11H7Q8NGC8 314 aa14.14□□□□□ -0.15
SYNM-201ENST00000328642 CD300LFQ8TDQ1 290 aa14.14□□□□□ -0.15
SYNM-201ENST00000328642 SLAMF9Q96A28 289 aa14.14□□□□□ -0.15
SYNM-201ENST00000328642 SLC25A21Q9BQT8 299 aaPredicted RBP14.14□□□□□ -0.15
SYNM-201ENST00000328642 C12orf10Q9HB07 376 aa14.14□□□□□ -0.15
SYNM-201ENST00000328642 ZNF286AQ9HBT8 521 aa14.14□□□□□ -0.15
SYNM-201ENST00000328642 PCDHGA9Q9Y5G4 932 aaKnown RBP14.14□□□□□ -0.15
SYNM-201ENST00000328642 A0A087WZY1 265 aa14.14□□□□□ -0.15
SYNM-201ENST00000328642 ZNF732B4DXR9 585 aa14.14□□□□□ -0.15
SYNM-201ENST00000328642 PTGFRP43088 359 aa14.14□□□□□ -0.15
SYNM-201ENST00000328642 CLINT1Q14677 625 aa14.14□□□□□ -0.15
SYNM-201ENST00000328642 HLXQ14774 488 aaPredicted RBP14.14□□□□□ -0.15
SYNM-201ENST00000328642 OR52H1Q8NGJ2 320 aa14.14□□□□□ -0.15
SYNM-201ENST00000328642 ZFAND1Q8TCF1 268 aa14.14□□□□□ -0.15
SYNM-201ENST00000328642 EMG1Q92979 244 aaKnown RBP14.14□□□□□ -0.15
SYNM-201ENST00000328642 CPNE4Q96A23 557 aaPredicted RBP14.14□□□□□ -0.15
SYNM-201ENST00000328642 SP9P0CG40 484 aa14.14□□□□□ -0.15
SYNM-201ENST00000328642 GLRA1P23415 457 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms