RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 MSGN1A6NI15 193 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 H0YIZ8 118 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 ZNF529Q6P280 563 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 OR14K1Q8NGZ2 314 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 ADAT1Q9BUB4 502 aaKnown RBP12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 GPR132Q9UNW8 380 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 AQP7P3A6NL99 342 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 TMEM225BP0DP42 221 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 TBPP20226 339 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 MSR1P21757 451 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 ZNF169Q14929 603 aaPredicted RBP12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 ANKRD55Q3KP44 614 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 TMEM88Q6PEY1 159 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 C6orf201Q7Z4U5 140 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 DTX1Q86Y01 620 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 ZSCAN4Q8NAM6 433 aaPredicted RBP12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 OR13G1Q8NGZ3 307 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 OR51F2Q8NH61 342 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 HDHD3Q9BSH5 251 aaPredicted RBP12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 OR5AC2Q9NZP5 309 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 FLVCR1Q9Y5Y0 555 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 LAMTOR5O43504 91 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 ANGPTL7O43827 346 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 CCL3P10147 92 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 GRB2P62993 217 aaKnown RBP12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 UBE2V2Q15819 145 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 FAHD2BQ6P2I3 314 aaPredicted RBP12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 AGBL5Q8NDL9 886 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 OR52H1Q8NGJ2 320 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 OR2AE1Q8NHA4 323 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 SAP25Q8TEE9 199 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 ZNF837Q96EG3 531 aaPredicted RBP12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 FAHD2AQ96GK7 314 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 LYZL4Q96KX0 146 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 RNF126Q9BV68 326 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 SLC6A15Q9H2J7 730 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 BARX1Q9HBU1 254 aaPredicted RBP12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 HDGFL3Q9Y3E1 203 aa12.35□□□□□ -0.43
ATP2C1-201ENST00000328560 GPR31O00270 319 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 TPT1P13693 172 aaKnown RBP12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 HLA-GP17693 338 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 SLC25A53Q5H9E4 307 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 CCDC36Q8IYA8 594 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 SLC39A7Q92504 469 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 PIK3IP1Q96FE7 263 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 GPR173Q9NS66 373 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 DKKL1Q9UK85 242 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 CHCHD2Q9Y6H1 151 aaPredicted RBP12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 MFNGO00587 321 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 SFT2D2O95562 160 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 EIF1P41567 113 aaKnown RBP12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 DUSP3P51452 185 aaPredicted RBP12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 SRSF4Q08170 494 aaKnown RBP12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 RAB32Q13637 225 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 BAP18Q8IXM2 172 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 ARRDC1Q8N5I2 433 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 EIF4E3Q8N5X7 224 aaKnown RBP12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 OR10C1Q96KK4 312 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 TREM1Q9NP99 234 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 NXT1Q9UKK6 140 aaKnown RBP12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 EML6Q6ZMW3 1958 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 FAM230AA0A1W2PPH8 454 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 BET1O15155 118 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 PATE4P0C8F1 98 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 GLI4P10075 376 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 GSK3AP49840 483 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 CYCSP99999 105 aaKnown RBP12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 GJC3Q8NFK1 279 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 SLC25A43Q8WUT9 341 aaPredicted RBP12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 CPNE2Q96FN4 548 aaPredicted RBP12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 PLEKHJ1Q9NW61 149 aa12.34□□□□□ -0.43
ATP2C1-201ENST00000328560 FAM186AA6NE01 2351 aa12.33□□□□□ -0.43
ATP2C1-201ENST00000328560 TOR1AO14656 332 aa12.33□□□□□ -0.44
ATP2C1-201ENST00000328560 SERPINA5P05154 406 aa12.33□□□□□ -0.44
ATP2C1-201ENST00000328560 HPNP05981 417 aa12.33□□□□□ -0.44
ATP2C1-201ENST00000328560 ECH1Q13011 328 aa12.33□□□□□ -0.44
ATP2C1-201ENST00000328560 BRICD5Q6PL45 260 aa12.33□□□□□ -0.44
ATP2C1-201ENST00000328560 OPN5Q6U736 354 aa12.33□□□□□ -0.44
ATP2C1-201ENST00000328560 DRAM2Q6UX65 266 aa12.33□□□□□ -0.44
ATP2C1-201ENST00000328560 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.33□□□□□ -0.44
ATP2C1-201ENST00000328560 UBALD2Q8IYN6 164 aa12.33□□□□□ -0.44
ATP2C1-201ENST00000328560 ULBP2Q9BZM5 246 aa12.33□□□□□ -0.44
ATP2C1-201ENST00000328560 NKX6-2Q9C056 277 aaPredicted RBP12.33□□□□□ -0.44
ATP2C1-201ENST00000328560 HRH4Q9H3N8 390 aa12.33□□□□□ -0.44
ATP2C1-201ENST00000328560 PIGMQ9H3S5 423 aa12.33□□□□□ -0.44
ATP2C1-201ENST00000328560 M0R135 149 aa12.33□□□□□ -0.44
ATP2C1-201ENST00000328560 TNFSF11O14788 317 aa12.33□□□□□ -0.44
ATP2C1-201ENST00000328560 F12P00748 615 aaPredicted RBP12.33□□□□□ -0.44
ATP2C1-201ENST00000328560 MPZP25189 248 aa12.33□□□□□ -0.44
ATP2C1-201ENST00000328560 ZNF799Q96GE5 643 aa12.33□□□□□ -0.44
ATP2C1-201ENST00000328560 RTBDNQ9BSG5 229 aaPredicted RBP12.33□□□□□ -0.44
ATP2C1-201ENST00000328560 FANCFQ9NPI8 374 aa12.33□□□□□ -0.44
ATP2C1-201ENST00000328560 TEX13DA0A0J9YY54 714 aaPredicted RBP12.32□□□□□ -0.44
ATP2C1-201ENST00000328560 ZNF705EA8MWA4 302 aaPredicted RBP12.32□□□□□ -0.44
ATP2C1-201ENST00000328560 AGPAT2O15120 278 aa12.32□□□□□ -0.44
ATP2C1-201ENST00000328560 NR2C1P13056 603 aa12.32□□□□□ -0.44
ATP2C1-201ENST00000328560 SUPT4H1P63272 117 aaKnown RBP12.32□□□□□ -0.44
ATP2C1-201ENST00000328560 VAX1Q5SQQ9 334 aa12.32□□□□□ -0.44
ATP2C1-201ENST00000328560 FAM122CQ6P4D5 195 aa12.32□□□□□ -0.44
ATP2C1-201ENST00000328560 C20orf196Q8IYI0 205 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms