RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 PTX4Q96A99 478 aa16.22■□□□□ 0.19
EXOSC3-201ENST00000327304 LYZL4Q96KX0 146 aa16.22■□□□□ 0.19
EXOSC3-201ENST00000327304 PLEKHA1Q9HB21 404 aa16.22■□□□□ 0.19
EXOSC3-201ENST00000327304 CGGBP1Q9UFW8 167 aaPredicted RBP16.22■□□□□ 0.19
EXOSC3-201ENST00000327304 GABARAPH6UMI1 98 aa16.22■□□□□ 0.19
EXOSC3-201ENST00000327304 MTRF1O75570 445 aaKnown RBP16.22■□□□□ 0.19
EXOSC3-201ENST00000327304 DHRS3O75911 302 aa16.22■□□□□ 0.19
EXOSC3-201ENST00000327304 CCL2P13500 99 aa16.22■□□□□ 0.19
EXOSC3-201ENST00000327304 CBR1P16152 277 aa16.22■□□□□ 0.19
EXOSC3-201ENST00000327304 ZNF14P17017 642 aaPredicted RBP16.22■□□□□ 0.19
EXOSC3-201ENST00000327304 STOMP27105 288 aa16.22■□□□□ 0.19
EXOSC3-201ENST00000327304 GRNP28799 593 aaKnown RBP16.22■□□□□ 0.19
EXOSC3-201ENST00000327304 ALKBH2Q6NS38 261 aa16.22■□□□□ 0.19
EXOSC3-201ENST00000327304 IZUMO1Q8IYV9 350 aa16.22■□□□□ 0.19
EXOSC3-201ENST00000327304 RNASE6Q93091 150 aaKnown RBP16.22■□□□□ 0.19
EXOSC3-201ENST00000327304 SOX7Q9BT81 388 aa16.22■□□□□ 0.19
EXOSC3-201ENST00000327304 KCNJ16Q9NPI9 418 aa16.22■□□□□ 0.19
EXOSC3-201ENST00000327304 DIABLOQ9NR28 239 aa16.22■□□□□ 0.19
EXOSC3-201ENST00000327304 ZNF391Q9UJN7 358 aa16.22■□□□□ 0.19
EXOSC3-201ENST00000327304 TMEM272A0A1B0GTI8 110 aa16.21■□□□□ 0.19
EXOSC3-201ENST00000327304 DHRS7CA6NNS2 312 aa16.21■□□□□ 0.19
EXOSC3-201ENST00000327304 LDLRAD4O15165 306 aa16.21■□□□□ 0.19
EXOSC3-201ENST00000327304 CTAG2O75638 210 aa16.21■□□□□ 0.19
EXOSC3-201ENST00000327304 ALX3O95076 343 aa16.21■□□□□ 0.19
EXOSC3-201ENST00000327304 ALDOBP05062 364 aa16.21■□□□□ 0.19
EXOSC3-201ENST00000327304 SERPINA5P05154 406 aa16.21■□□□□ 0.19
EXOSC3-201ENST00000327304 COX5BP10606 129 aa16.21■□□□□ 0.19
EXOSC3-201ENST00000327304 THBS4P35443 961 aa16.21■□□□□ 0.19
EXOSC3-201ENST00000327304 KIR2DL3P43628 341 aa16.21■□□□□ 0.19
EXOSC3-201ENST00000327304 DGCR2P98153 550 aa16.21■□□□□ 0.19
EXOSC3-201ENST00000327304 CELF2-AS1Q8N7Q2 184 aa16.21■□□□□ 0.19
EXOSC3-201ENST00000327304 OR52N4Q8NGI2 321 aa16.21■□□□□ 0.19
EXOSC3-201ENST00000327304 OR13C9Q8NGT0 318 aa16.21■□□□□ 0.19
EXOSC3-201ENST00000327304 NEURL2Q9BR09 285 aa16.21■□□□□ 0.19
EXOSC3-201ENST00000327304 IGKV3-15P01624 115 aa16.2■□□□□ 0.18
EXOSC3-201ENST00000327304 FAM157BP0CG42 384 aa16.2■□□□□ 0.18
EXOSC3-201ENST00000327304 TAS2R20P59543 309 aa16.2■□□□□ 0.18
EXOSC3-201ENST00000327304 PPA1Q15181 289 aa16.2■□□□□ 0.18
EXOSC3-201ENST00000327304 GFOD2Q3B7J2 385 aa16.2■□□□□ 0.18
EXOSC3-201ENST00000327304 TOMM5Q8N4H5 51 aa16.2■□□□□ 0.18
EXOSC3-201ENST00000327304 PP6455Q8WZ26 134 aa16.2■□□□□ 0.18
EXOSC3-201ENST00000327304 MUCL1Q96DR8 90 aa16.2■□□□□ 0.18
EXOSC3-201ENST00000327304 ITPKCQ96DU7 683 aa16.2■□□□□ 0.18
EXOSC3-201ENST00000327304 POM121L2Q96KW2 1035 aa16.2■□□□□ 0.18
EXOSC3-201ENST00000327304 C7orf50Q9BRJ6 194 aaKnown RBP16.2■□□□□ 0.18
EXOSC3-201ENST00000327304 NPAP1Q9NZP6 1156 aa16.2■□□□□ 0.18
EXOSC3-201ENST00000327304 C5orf49A4QMS7 147 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 C5orf63A6NC05 138 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 CD3GP09693 182 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 RAB6AP20340 208 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 TFF3Q07654 80 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 PLA2G7Q13093 441 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 SNAI3Q3KNW1 292 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 SEZ6L2Q6UXD5 910 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 DNM1P46Q6ZS02 220 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 OR5AS1Q8N127 324 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 PAQR4Q8N4S7 273 aaPredicted RBP16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 ZNF808Q8N4W9 903 aaPredicted RBP16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 SLC30A7Q8NEW0 376 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 OR4D6Q8NGJ1 314 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 CHAC2Q8WUX2 184 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 PHF21AQ96BD5 680 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 OR10A4Q9H209 315 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 CNTD2Q9H8S5 307 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 CACNG2Q9Y698 323 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 UBR5O95071 2799 aaPredicted RBP16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 A0A0A6YYH2 397 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 FAM240BA0A1B0GVZ2 78 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 GGT3PA6NGU5 568 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 A6NJ64 397 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 CENPXA8MT69 81 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 IGLV1-44P01699 117 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 AGAP20933 346 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 CCNOP22674 350 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 APLNRP35414 380 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 ZNF83P51522 516 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 EFNB2P52799 333 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 DYRK1AQ13627 763 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 SNTB1Q13884 538 aaKnown RBP16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 GPR176Q14439 515 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 PLET1Q6UQ28 207 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 UTS2BQ765I0 119 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 FCAMRQ8WWV6 532 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 SGK3Q96BR1 496 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 USB1Q9BQ65 265 aaKnown RBP16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 RGCCQ9H4X1 137 aa16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 RBMX2Q9Y388 322 aaKnown RBP16.19■□□□□ 0.18
EXOSC3-201ENST00000327304 SPTBN1Q01082 2364 aaKnown RBP16.18■□□□□ 0.18
EXOSC3-201ENST00000327304 IGHV1-18A0A0C4DH31 117 aa16.18■□□□□ 0.18
EXOSC3-201ENST00000327304 CLDN14O95500 239 aa16.18■□□□□ 0.18
EXOSC3-201ENST00000327304 BPNT1O95861 308 aa16.18■□□□□ 0.18
EXOSC3-201ENST00000327304 ECDO95905 644 aaPredicted RBP16.18■□□□□ 0.18
EXOSC3-201ENST00000327304 THBDP07204 575 aa16.18■□□□□ 0.18
EXOSC3-201ENST00000327304 ZNF93P35789 620 aaPredicted RBP16.18■□□□□ 0.18
EXOSC3-201ENST00000327304 KRT74Q7RTS7 529 aa16.18■□□□□ 0.18
EXOSC3-201ENST00000327304 FAM169BQ8N8A8 192 aa16.18■□□□□ 0.18
EXOSC3-201ENST00000327304 FBLN5Q9UBX5 448 aa16.18■□□□□ 0.18
EXOSC3-201ENST00000327304 ADGRG4Q8IZF6 3080 aa16.18■□□□□ 0.18
EXOSC3-201ENST00000327304 LCATP04180 440 aa16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 HNRNPCP07910 306 aaKnown RBP eCLIP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 312 ms