RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 ZNHIT1O43257 154 aa15.43■□□□□ 0.06
RAB39A-201ENST00000320578 ZNF14P17017 642 aaPredicted RBP15.43■□□□□ 0.06
RAB39A-201ENST00000320578 FAUP35544 74 aaKnown RBP15.43■□□□□ 0.06
RAB39A-201ENST00000320578 ZP1P60852 638 aa15.43■□□□□ 0.06
RAB39A-201ENST00000320578 GK2Q14410 553 aaPredicted RBP15.43■□□□□ 0.06
RAB39A-201ENST00000320578 RSBN1Q5VWQ0 802 aaPredicted RBP15.43■□□□□ 0.06
RAB39A-201ENST00000320578 MTFR2Q6P444 385 aa15.43■□□□□ 0.06
RAB39A-201ENST00000320578 VWA1Q6PCB0 445 aa15.43■□□□□ 0.06
RAB39A-201ENST00000320578 FAM89BQ8N5H3 189 aa15.43■□□□□ 0.06
RAB39A-201ENST00000320578 SLC30A7Q8NEW0 376 aa15.43■□□□□ 0.06
RAB39A-201ENST00000320578 OR10R2Q8NGX6 335 aa15.43■□□□□ 0.06
RAB39A-201ENST00000320578 STARD4Q96DR4 205 aa15.43■□□□□ 0.06
RAB39A-201ENST00000320578 SEH1LQ96EE3 360 aa15.43■□□□□ 0.06
RAB39A-201ENST00000320578 TMEM59Q9BXS4 323 aa15.43■□□□□ 0.06
RAB39A-201ENST00000320578 ACTR6Q9GZN1 396 aa15.43■□□□□ 0.06
RAB39A-201ENST00000320578 SLC7A11Q9UPY5 501 aa15.43■□□□□ 0.06
RAB39A-201ENST00000320578 INMT-MINDY4F8WBC2 141 aa15.43■□□□□ 0.06
RAB39A-201ENST00000320578 CST4P01036 141 aa15.43■□□□□ 0.06
RAB39A-201ENST00000320578 TCRBP04435 133 aa15.43■□□□□ 0.06
RAB39A-201ENST00000320578 PTHLHP12272 177 aa15.43■□□□□ 0.06
RAB39A-201ENST00000320578 RBP2P50120 134 aa15.43■□□□□ 0.06
RAB39A-201ENST00000320578 PER3P56645 1201 aa15.43■□□□□ 0.06
RAB39A-201ENST00000320578 MRPL49Q13405 166 aaKnown RBP15.43■□□□□ 0.06
RAB39A-201ENST00000320578 TBC1D28Q2M2D7 210 aa15.43■□□□□ 0.06
RAB39A-201ENST00000320578 STEAP2Q8NFT2 490 aa15.43■□□□□ 0.06
RAB39A-201ENST00000320578 TNFAIP8L1Q8WVP5 186 aa15.43■□□□□ 0.06
RAB39A-201ENST00000320578 TUBD1Q9UJT1 453 aa15.43■□□□□ 0.06
RAB39A-201ENST00000320578 APC2O95996 2303 aa15.42■□□□□ 0.06
RAB39A-201ENST00000320578 CBR1P16152 277 aa15.42■□□□□ 0.06
RAB39A-201ENST00000320578 CCNOP22674 350 aa15.42■□□□□ 0.06
RAB39A-201ENST00000320578 MTCP1P56278 107 aa15.42■□□□□ 0.06
RAB39A-201ENST00000320578 RPS27AP62979 156 aaKnown RBP15.42■□□□□ 0.06
RAB39A-201ENST00000320578 FOXF2Q12947 444 aa15.42■□□□□ 0.06
RAB39A-201ENST00000320578 MOGAT2Q3SYC2 334 aa15.42■□□□□ 0.06
RAB39A-201ENST00000320578 C1QTNF12Q5T7M4 302 aa15.42■□□□□ 0.06
RAB39A-201ENST00000320578 BEND4Q6ZU67 534 aa15.42■□□□□ 0.06
RAB39A-201ENST00000320578 BTN2A1Q7KYR7 527 aa15.42■□□□□ 0.06
RAB39A-201ENST00000320578 MRPL21Q7Z2W9 205 aaKnown RBP15.42■□□□□ 0.06
RAB39A-201ENST00000320578 FTMTQ8N4E7 242 aa15.42■□□□□ 0.06
RAB39A-201ENST00000320578 OR56B1Q8NGI3 324 aa15.42■□□□□ 0.06
RAB39A-201ENST00000320578 BORCS8Q96FH0 119 aa15.42■□□□□ 0.06
RAB39A-201ENST00000320578 POM121Q96HA1 1249 aa15.42■□□□□ 0.06
RAB39A-201ENST00000320578 S100A13Q99584 98 aa15.42■□□□□ 0.06
RAB39A-201ENST00000320578 TM2D1Q9BX74 207 aa15.42■□□□□ 0.06
RAB39A-201ENST00000320578 ETAA1Q9NY74 926 aa15.42■□□□□ 0.06
RAB39A-201ENST00000320578 MYEF2Q9P2K5 600 aaKnown RBP15.42■□□□□ 0.06
RAB39A-201ENST00000320578 STARD10Q9Y365 291 aa15.42■□□□□ 0.06
RAB39A-201ENST00000320578 FAM215AQ9Y5M1 114 aa15.42■□□□□ 0.06
RAB39A-201ENST00000320578 RTTNQ86VV8 2226 aa15.42■□□□□ 0.06
RAB39A-201ENST00000320578 HMX3A6NHT5 357 aa15.41■□□□□ 0.06
RAB39A-201ENST00000320578 ZNF780AO75290 641 aaPredicted RBP15.41■□□□□ 0.06
RAB39A-201ENST00000320578 TPOP07202 933 aa15.41■□□□□ 0.06
RAB39A-201ENST00000320578 GSTP1P09211 210 aaKnown RBP15.41■□□□□ 0.06
RAB39A-201ENST00000320578 GIFP27352 417 aa15.41■□□□□ 0.06
RAB39A-201ENST00000320578 TDGF1P3P51864 188 aa15.41■□□□□ 0.06
RAB39A-201ENST00000320578 ATP1B3P54709 279 aa15.41■□□□□ 0.06
RAB39A-201ENST00000320578 ARL6IP1Q15041 203 aa15.41■□□□□ 0.06
RAB39A-201ENST00000320578 FAM169BQ8N8A8 192 aa15.41■□□□□ 0.06
RAB39A-201ENST00000320578 TMEM229BQ8NBD8 167 aa15.41■□□□□ 0.06
RAB39A-201ENST00000320578 ACBD4Q8NC06 268 aa15.41■□□□□ 0.06
RAB39A-201ENST00000320578 TMEM104Q8NE00 496 aa15.41■□□□□ 0.06
RAB39A-201ENST00000320578 PXT1Q8NFP0 134 aa15.41■□□□□ 0.06
RAB39A-201ENST00000320578 EXTL1Q92935 676 aa15.41■□□□□ 0.06
RAB39A-201ENST00000320578 MOV10Q9HCE1 1003 aaKnown RBP15.41■□□□□ 0.06
RAB39A-201ENST00000320578 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.41■□□□□ 0.06
RAB39A-201ENST00000320578 ZNF71Q9NQZ8 489 aaPredicted RBP15.41■□□□□ 0.06
RAB39A-201ENST00000320578 ING4Q9UNL4 249 aa15.41■□□□□ 0.06
RAB39A-201ENST00000320578 RAD51DO75771 328 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 LYZL6O75951 148 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 MPIG6BO95866 241 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 DHFRP00374 187 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 IL2RAP01589 272 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 CEACAM8P31997 349 aaPredicted RBP15.4■□□□□ 0.06
RAB39A-201ENST00000320578 WNT5AP41221 380 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 TATDN3Q17R31 274 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 PCGF3Q3KNV8 242 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 CDNFQ49AH0 187 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 AKAP14Q86UN6 197 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 GLCCI1Q86VQ1 547 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 Q8NA96 180 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 IL36GQ9NZH8 169 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 A0A0B4J293 547 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 WIPF3A6NGB9 483 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 TOXO94900 526 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 MT-ND4P03905 459 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 CCL2P13500 99 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 PSMB1P20618 241 aaKnown RBP15.4■□□□□ 0.06
RAB39A-201ENST00000320578 TUBG1P23258 451 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 VEGFCP49767 419 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 PNLIPRP3Q17RR3 467 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 Q6ZTK2 550 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 C1QL2Q7Z5L3 287 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 CD163Q86VB7 1156 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 WDR31Q8NA23 367 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 ZSCAN4Q8NAM6 433 aaPredicted RBP15.4■□□□□ 0.06
RAB39A-201ENST00000320578 OR56B4Q8NH76 319 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 NPRL2Q8WTW4 380 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 WBP1Q96G27 269 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 SFXN3Q9BWM7 321 aa15.4■□□□□ 0.06
RAB39A-201ENST00000320578 METTL9Q9H1A3 318 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms