RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 SSUH2Q9Y2M2 353 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 MRPS18BQ9Y676 258 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 IGLV1-36A0A0B4J1U3 117 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 CYTIPO60759 359 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 RRAS2P62070 204 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 SSX1Q16384 188 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 TMEM65Q6PI78 240 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 ADGRE4PQ86SQ3 457 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 CASTOR1Q8WTX7 329 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 PRRT1Q99946 306 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 PBOV1Q9GZY1 135 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 ZNF703Q9H7S9 590 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 EMC7Q9NPA0 242 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 NUDT15Q9NV35 164 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 LOC100289279A0A1B0GTE1 492 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 SPOCK1Q08629 439 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 AADACL3Q5VUY0 350 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 LAIR2Q6ISS4 152 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 HES4Q9HCC6 221 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 LRP12Q9Y561 859 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 TRAV18A0A075B6X5 111 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 A0A1W2PPK0 400 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 SULT1C2O00338 296 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 GDF9O60383 454 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 LYZL6O75951 148 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 PPP1CBP62140 327 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 OR52W1Q6IF63 320 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 RDH10Q8IZV5 341 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 BHLHE23Q8NDY6 225 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 NOX3Q9HBY0 568 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 MS4A18H0YCH9 400 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 P2RY10O00398 339 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 CELA2AP08217 269 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 GAS1P54826 345 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 LSM11P83369 360 aaKnown RBP eCLIP7.56□□□□□ -1.21e-7■■■■■ 32.8
PDLIM5-201ENST00000317968 LTBQ06643 244 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 MS4A18Q3C1V0 323 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 FOXB2Q5VYV0 432 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 OR1M1Q8NGA1 313 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 EDARADDQ8WWZ3 215 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 DCUN1D4Q92564 292 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 SLC22A13Q9Y226 551 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 FLVCR1Q9Y5Y0 555 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 IFITM5A6NNB3 132 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 ATP5J2P56134 94 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 FGL1Q08830 312 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 CAMK2BQ13554 666 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 C20orf196Q8IYI0 205 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 OR6F1Q8NGZ6 308 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 ABCG5Q9H222 651 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 PARD6AQ9NPB6 346 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 KCNIP2Q9NS61 270 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 RNF115Q9Y4L5 304 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 DHRS7CA6NNS2 312 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 E9PQ18 207 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 SLC17A2O00624 439 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 TNFSF10P50591 281 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 FUT6P51993 359 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 CYCSP99999 105 aaKnown RBP7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 GSG1LQ6UXU4 331 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 SHISA5Q8N114 240 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 POM121Q96HA1 1249 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 GFOD1Q9NXC2 390 aa7.56□□□□□ -1.2
PDLIM5-201ENST00000317968 CDRT15L2A8MXV6 281 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 SHOXO15266 292 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 SCAF4O95104 1147 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 SOX18P35713 384 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 SNRPNP63162 240 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 OR13C9Q8NGT0 318 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 POC1BQ8TC44 478 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 PDCD1LG2Q9BQ51 273 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 SLIRPQ9GZT3 109 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 MRM2Q9UI43 246 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 hADV38S2A0JD32 116 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 OR4C45A6NMZ5 311 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 CTDSP2O14595 271 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 ZNF93P35789 620 aaPredicted RBP7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 GSK3AP49840 483 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 HES5Q5TA89 166 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 LINC01590Q5TEZ4 76 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 PLXDC2Q6UX71 529 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 AKAP14Q86UN6 197 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 DTX1Q86Y01 620 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 PARP16Q8N5Y8 322 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 CCL17Q92583 94 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 TOMM40LQ969M1 308 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 ZNF251Q9BRH9 671 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 SAP30LQ9HAJ7 183 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 TUBD1Q9UJT1 453 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 J3QKU1 62 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 CLDN14O95500 239 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 TFP02787 698 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 PGA4P0DJD7 388 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 PGA3P0DJD8 388 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 AKR1C4P17516 323 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 GNG3P63215 75 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 HYAL4Q2M3T9 481 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 OR2W3Q7Z3T1 314 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 FOXRED2Q8IWF2 684 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 ABHD17AQ96GS6 310 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms