RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 DEFB112Q30KQ8 113 aa14.71□□□□□ -0.05
TPM1-203ENST00000317516 FAHD1Q6P587 224 aa14.71□□□□□ -0.05
TPM1-203ENST00000317516 OR10Z1Q8NGY1 313 aa14.71□□□□□ -0.05
TPM1-203ENST00000317516 OR5K1Q8NHB7 308 aa14.71□□□□□ -0.05
TPM1-203ENST00000317516 OR5P3Q8WZ94 311 aa14.71□□□□□ -0.05
TPM1-203ENST00000317516 ST8SIA4Q92187 359 aa14.71□□□□□ -0.05
TPM1-203ENST00000317516 FAM71F1Q96KD3 344 aaPredicted RBP14.71□□□□□ -0.05
TPM1-203ENST00000317516 DMRTB1Q96MA1 342 aa14.71□□□□□ -0.05
TPM1-203ENST00000317516 CCL13Q99616 98 aa14.71□□□□□ -0.05
TPM1-203ENST00000317516 PKP2Q99959 881 aa14.71□□□□□ -0.05
TPM1-203ENST00000317516 FAM53CQ9NYF3 392 aa14.71□□□□□ -0.05
TPM1-203ENST00000317516 DNAJB11Q9UBS4 358 aa14.71□□□□□ -0.05
TPM1-203ENST00000317516 SOX21Q9Y651 276 aaPredicted RBP14.71□□□□□ -0.05
TPM1-203ENST00000317516 ANK2Q01484 3957 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 TMEM269A0A1B0GVZ9 245 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 POM121CA8CG34 1229 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 SRRM5B3KS81 715 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 SFTPBP07988 381 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 MMP9P14780 707 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 ATP6V1B1P15313 513 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 ACKR3P25106 362 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 DCTDP32321 178 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 DAPP51397 102 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 ACTR3P61158 418 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 ARF6P62330 175 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 PTGES3Q15185 160 aaKnown RBP14.7□□□□□ -0.06
TPM1-203ENST00000317516 LRRC10Q5BKY1 277 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 FAM76BQ5HYJ3 339 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 WDR38Q5JTN6 314 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 ZDHHC23Q8IYP9 409 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 OR8B12Q8NGG6 310 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 LYZL4Q96KX0 146 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 CADM1Q9BY67 442 aaKnown RBP14.7□□□□□ -0.06
TPM1-203ENST00000317516 DNTTIP1Q9H147 329 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 PPP1R3EQ9H7J1 279 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 HAO2Q9NYQ3 351 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 RPUSD1Q9UJJ7 312 aaKnown RBP14.7□□□□□ -0.06
TPM1-203ENST00000317516 KLHDC2Q9Y2U9 406 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 PCDHGB1Q9Y5G3 927 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 TENM1Q9UKZ4 2725 aa14.7□□□□□ -0.06
TPM1-203ENST00000317516 A0A0U1RQV5 110 aa14.69□□□□□ -0.06
TPM1-203ENST00000317516 CENPVL3A0A0U1RRI6 287 aa14.69□□□□□ -0.06
TPM1-203ENST00000317516 ZNF816-ZNF321PA0A0X1KG74 233 aa14.69□□□□□ -0.06
TPM1-203ENST00000317516 G3V2T6 193 aa14.69□□□□□ -0.06
TPM1-203ENST00000317516 HOXA3O43365 443 aaPredicted RBP14.69□□□□□ -0.06
TPM1-203ENST00000317516 SPRY1O43609 319 aaPredicted RBP14.69□□□□□ -0.06
TPM1-203ENST00000317516 ATP5HO75947 161 aa14.69□□□□□ -0.06
TPM1-203ENST00000317516 CRYBA1P05813 215 aa14.69□□□□□ -0.06
TPM1-203ENST00000317516 HCCSP53701 268 aa14.69□□□□□ -0.06
TPM1-203ENST00000317516 ROM1Q03395 351 aa14.69□□□□□ -0.06
TPM1-203ENST00000317516 BNIP1Q12981 228 aa14.69□□□□□ -0.06
TPM1-203ENST00000317516 ZNF829Q3KNS6 432 aaPredicted RBP14.69□□□□□ -0.06
TPM1-203ENST00000317516 CDONQ4KMG0 1287 aa14.69□□□□□ -0.06
TPM1-203ENST00000317516 ATPAF1Q5TC12 328 aaPredicted RBP14.69□□□□□ -0.06
TPM1-203ENST00000317516 Q6YL49 198 aa14.69□□□□□ -0.06
TPM1-203ENST00000317516 THAP5Q7Z6K1 395 aa14.69□□□□□ -0.06
TPM1-203ENST00000317516 COMMD2Q86X83 199 aa14.69□□□□□ -0.06
TPM1-203ENST00000317516 ZNF679Q8IYX0 411 aa14.69□□□□□ -0.06
TPM1-203ENST00000317516 CMTM4Q8IZR5 234 aa14.69□□□□□ -0.06
TPM1-203ENST00000317516 RPL3LQ92901 407 aaKnown RBP14.69□□□□□ -0.06
TPM1-203ENST00000317516 UTP4Q969X6 686 aaKnown RBP14.69□□□□□ -0.06
TPM1-203ENST00000317516 MED30Q96HR3 178 aa14.69□□□□□ -0.06
TPM1-203ENST00000317516 TBX15Q96SF7 602 aa14.69□□□□□ -0.06
TPM1-203ENST00000317516 SIRPDQ9H106 197 aa14.69□□□□□ -0.06
TPM1-203ENST00000317516 KRT84Q9NSB2 600 aa14.69□□□□□ -0.06
TPM1-203ENST00000317516 ACOXLQ9NUZ1 547 aa14.69□□□□□ -0.06
TPM1-203ENST00000317516 ENOPH1Q9UHY7 261 aa14.69□□□□□ -0.06
TPM1-203ENST00000317516 KPTNQ9Y664 436 aa14.69□□□□□ -0.06
TPM1-203ENST00000317516 MDFIC2A0A1B0GVS7 189 aa14.68□□□□□ -0.06
TPM1-203ENST00000317516 NKX6-3A6NJ46 265 aa14.68□□□□□ -0.06
TPM1-203ENST00000317516 MRPL3P09001 348 aaKnown RBP14.68□□□□□ -0.06
TPM1-203ENST00000317516 RIDAP52758 137 aaKnown RBP14.68□□□□□ -0.06
TPM1-203ENST00000317516 RIPPLY1Q0D2K3 151 aa14.68□□□□□ -0.06
TPM1-203ENST00000317516 MEPCEQ7L2J0 689 aaKnown RBP14.68□□□□□ -0.06
TPM1-203ENST00000317516 ZDHHC13Q8IUH4 622 aa14.68□□□□□ -0.06
TPM1-203ENST00000317516 TMEM86BQ8N661 226 aa14.68□□□□□ -0.06
TPM1-203ENST00000317516 SCCPDHQ8NBX0 429 aa14.68□□□□□ -0.06
TPM1-203ENST00000317516 LHX4Q969G2 390 aa14.68□□□□□ -0.06
TPM1-203ENST00000317516 OR8B4Q96RC9 309 aa14.68□□□□□ -0.06
TPM1-203ENST00000317516 CNN2Q99439 309 aaKnown RBP14.68□□□□□ -0.06
TPM1-203ENST00000317516 MNTQ99583 582 aa14.68□□□□□ -0.06
TPM1-203ENST00000317516 FAM206AQ9NX38 181 aa14.68□□□□□ -0.06
TPM1-203ENST00000317516 IKZF2Q9UKS7 526 aa14.68□□□□□ -0.06
TPM1-203ENST00000317516 DOCK11Q5JSL3 2073 aa14.68□□□□□ -0.06
TPM1-203ENST00000317516 IGHV1-69DA0A0B4J2H0 117 aa14.67□□□□□ -0.06
TPM1-203ENST00000317516 A0A1B0GVI7 797 aa14.67□□□□□ -0.06
TPM1-203ENST00000317516 CCDC182A6NF36 153 aa14.67□□□□□ -0.06
TPM1-203ENST00000317516 SLC22A31A6NKX4 558 aa14.67□□□□□ -0.06
TPM1-203ENST00000317516 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.67□□□□□ -0.06
TPM1-203ENST00000317516 PSMD9O00233 223 aa14.67□□□□□ -0.06
TPM1-203ENST00000317516 MTRF1O75570 445 aaKnown RBP14.67□□□□□ -0.06
TPM1-203ENST00000317516 IGHV1-69P01742 117 aa14.67□□□□□ -0.06
TPM1-203ENST00000317516 FASP25445 335 aa14.67□□□□□ -0.06
TPM1-203ENST00000317516 TGM4P49221 684 aa14.67□□□□□ -0.06
TPM1-203ENST00000317516 GMFBP60983 142 aa14.67□□□□□ -0.06
TPM1-203ENST00000317516 GNG3P63215 75 aa14.67□□□□□ -0.06
TPM1-203ENST00000317516 IKZF1Q13422 519 aa14.67□□□□□ -0.06
TPM1-203ENST00000317516 ATP6AP1Q15904 470 aa14.67□□□□□ -0.06
TPM1-203ENST00000317516 CEACAM21Q3KPI0 293 aa14.67□□□□□ -0.06
TPM1-203ENST00000317516 RUSC1-AS1Q66K80 236 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms