RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 P2RY10O00398 339 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 ONECUT2O95948 504 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 BGLAPP02818 100 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 PI3P19957 117 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 RPL27P61353 136 aaKnown RBP15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 AWAT2Q6E213 333 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 DHRS11Q6UWP2 260 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 HOGA1Q86XE5 327 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 NKAIN3Q8N8D7 197 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 OR4K15Q8NH41 348 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 MYOTQ9UBF9 498 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 OR52A1Q9UKL2 312 aa15.18■□□□□ 0.02
SCAMP4-201ENST00000316097 EIF1BO60739 113 aaKnown RBP15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 RCC1P18754 421 aaPredicted RBP15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 CXCR1P25024 350 aa15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 EIF1P41567 113 aaKnown RBP15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 ID4P47928 161 aa15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 TMEM128Q5BJH2 165 aa15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 RPL7L1Q6DKI1 246 aaKnown RBP15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 LYPD6Q86Y78 171 aa15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 AKR1E2Q96JD6 320 aa15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 RPS10P5Q9NQ39 176 aa15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 RALGAPA1Q6GYQ0 2036 aa15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 SSX5O60225 188 aa15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 ZNF883P0CG24 379 aa15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 GNALP38405 381 aa15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 NPY4RP50391 375 aa15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 FABP9Q0Z7S8 132 aa15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 TGIF1Q15583 401 aa15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 OR10G3Q8NGC4 313 aa15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 OR52N4Q8NGI2 321 aa15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 AQP10Q96PS8 301 aa15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 OR11A1Q9GZK7 315 aa15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 SLC5A7Q9GZV3 580 aa15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 ADAM19Q9H013 955 aa15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 G6PC2Q9NQR9 355 aa15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 VDAC3Q9Y277 283 aa15.17■□□□□ 0.02
SCAMP4-201ENST00000316097 FREM3P0C091 2139 aa15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 A0A1W2PNU3 283 aaPredicted RBP15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 RAB32Q13637 225 aa15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 PCOLCEQ15113 449 aa15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 TIPARPQ7Z3E1 657 aaKnown RBP15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 ZNF519Q8TB69 540 aa15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 TMEM230Q96A57 120 aa15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 FGGYQ96C11 551 aa15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 DEFB126Q9BYW3 111 aa15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 EGLN1Q9GZT9 426 aa15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 C5orf66Q9H5L9 145 aa15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 TAF9BQ9HBM6 251 aa15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 MIOXQ9UGB7 285 aa15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 COA3Q9Y2R0 106 aaPredicted RBP15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 KNTC1P50748 2209 aa15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 SRSF10O75494 262 aaKnown RBP15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 CD5P06127 495 aa15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 VSIG8P0DPA2 414 aa15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 CLEC18BQ6UXF7 455 aa15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 LINC00346Q8IVM7 164 aa15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 GPR119Q8TDV5 335 aa15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 KIRREL1Q96J84 757 aa15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 GHRLQ9UBU3 117 aa15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 TINAGQ9UJW2 476 aa15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 HS3ST3B1Q9Y662 390 aa15.16■□□□□ 0.02
SCAMP4-201ENST00000316097 TMEM269A0A1B0GVZ9 245 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 FBXO24O75426 580 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 ZFAND5O76080 213 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 FCGR3AP08637 254 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 S100A10P60903 97 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 DCAF12Q5T6F0 453 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 DHRS13Q6UX07 377 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 FOXRED2Q8IWF2 684 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 TERB2Q8NHR7 220 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 LOXL4Q96JB6 756 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 OR10C1Q96KK4 312 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 PTGES2Q9H7Z7 377 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 METTL8Q9H825 291 aaKnown RBP15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 FLVCR1Q9Y5Y0 555 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 COL5A1P20908 1838 aaPredicted RBP15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 TRAV36DV7A0A075B6V5 113 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 A0A1W2PQD3 144 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 MFNGO00587 321 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 OPN1LWP04000 364 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 CSTBP04080 98 aaKnown RBP15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 FOXK1P85037 733 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 MAMDC2Q7Z304 686 aaPredicted RBP15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 NICN1Q9BSH3 213 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 RAB18Q9NP72 206 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 KLRF1Q9NZS2 232 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 GSKIPQ9P0R6 139 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 C19orf25Q9UFG5 118 aaPredicted RBP15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 CACFD1Q9UGQ2 172 aa15.15■□□□□ 0.02
SCAMP4-201ENST00000316097 TRBV23-1A0A0A0MS06 115 aa15.14■□□□□ 0.01
SCAMP4-201ENST00000316097 C9J4A7 227 aa15.14■□□□□ 0.01
SCAMP4-201ENST00000316097 TXNL1O43396 289 aa15.14■□□□□ 0.01
SCAMP4-201ENST00000316097 SFT2D2O95562 160 aa15.14■□□□□ 0.01
SCAMP4-201ENST00000316097 LYL1P12980 280 aa15.14■□□□□ 0.01
SCAMP4-201ENST00000316097 ZNF14P17017 642 aaPredicted RBP15.14■□□□□ 0.01
SCAMP4-201ENST00000316097 TBPP20226 339 aa15.14■□□□□ 0.01
SCAMP4-201ENST00000316097 PAX6P26367 422 aa15.14■□□□□ 0.01
SCAMP4-201ENST00000316097 HGFACQ04756 655 aa15.14■□□□□ 0.01
SCAMP4-201ENST00000316097 EIF5AL1Q6IS14 154 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms