RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 GUSBP11Q6P575 273 aa12.32□□□□□ -0.44
SPAST-201ENST00000315285 ANKRD37Q7Z713 158 aa12.32□□□□□ -0.44
SPAST-201ENST00000315285 ATG4DQ86TL0 474 aaPredicted RBP12.32□□□□□ -0.44
SPAST-201ENST00000315285 GNRHR2Q96P88 292 aa12.32□□□□□ -0.44
SPAST-201ENST00000315285 CRISPLD2Q9H0B8 497 aa12.32□□□□□ -0.44
SPAST-201ENST00000315285 LIN7CQ9NUP9 197 aaKnown RBP12.32□□□□□ -0.44
SPAST-201ENST00000315285 RPH3ALQ9UNE2 315 aa12.32□□□□□ -0.44
SPAST-201ENST00000315285 CTDSPLO15194 276 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 TNFSF14O43557 240 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 GSTZ1O43708 216 aaPredicted RBP12.31□□□□□ -0.44
SPAST-201ENST00000315285 MPZL1O95297 269 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 FAM157BP0CG42 384 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 ZP3P21754 424 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 DHODHQ02127 395 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 MPPED2Q15777 294 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 ABI3BPQ7Z7G0 1075 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 GCNT2Q8N0V5 402 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 ZADH2Q8N4Q0 377 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 RBMXL3Q8N7X1 1067 aaKnown RBP12.31□□□□□ -0.44
SPAST-201ENST00000315285 NKX6-3A6NJ46 265 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 SCAF4O95104 1147 aaKnown RBP12.31□□□□□ -0.44
SPAST-201ENST00000315285 DRAM2Q6UX65 266 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 OR52N4Q8NGI2 321 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 WBP1LQ9NX94 342 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 PLXNB2O15031 1838 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 IGHV1OR15-9A0A0B4J2B8 117 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 FUT3P21217 361 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 SRSF5Q13243 272 aaKnown RBP12.31□□□□□ -0.44
SPAST-201ENST00000315285 RAB35Q15286 201 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 PLA1AQ53H76 456 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 MESTQ5EB52 335 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 H1FXQ92522 213 aaKnown RBP12.31□□□□□ -0.44
SPAST-201ENST00000315285 LRRC3BQ96PB8 259 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 MRPS18AQ9NVS2 196 aaKnown RBP12.31□□□□□ -0.44
SPAST-201ENST00000315285 MED9Q9NWA0 146 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 GP1BAP07359 652 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 PTGFRP43088 359 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 ETFDHQ16134 617 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 C1QL3Q5VWW1 255 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 FAM199XQ6PEV8 388 aaPredicted RBP12.31□□□□□ -0.44
SPAST-201ENST00000315285 TMEM91Q6ZNR0 172 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 THNSL2Q86YJ6 484 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 CARFQ8N187 725 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 C15orf54Q8N8G6 183 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 HGDQ93099 445 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 MCHR2Q969V1 340 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 TECTBQ96PL2 329 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 RNF150Q9ULK6 438 aa12.31□□□□□ -0.44
SPAST-201ENST00000315285 DHRS3O75911 302 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 S100A7AQ86SG5 101 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 SLC38A6Q8IZM9 456 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 CHST6Q9GZX3 395 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 CNTD2Q9H8S5 307 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 RHOFQ9HBH0 211 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 NIT2Q9NQR4 276 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 FRRS1LQ9P0K9 344 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 H7BYZ3 331 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 HRKO00198 91 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 IAPPP10997 89 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 GLRA1P23415 457 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 WIPI1Q5MNZ9 446 aaPredicted RBP12.3□□□□□ -0.44
SPAST-201ENST00000315285 UBALD2Q8IYN6 164 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 LHX4Q969G2 390 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 ZNF768Q9H5H4 540 aaKnown RBP12.3□□□□□ -0.44
SPAST-201ENST00000315285 CES1P1Q9UKY3 287 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 PRSS42Q7Z5A4 293 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 EXTL1Q92935 676 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 APOBEC3DQ96AK3 386 aaPredicted RBP12.3□□□□□ -0.44
SPAST-201ENST00000315285 PRRX2Q99811 253 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 ZNF230Q9UIE0 474 aaPredicted RBP12.3□□□□□ -0.44
SPAST-201ENST00000315285 ICAM5Q9UMF0 924 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 LRRC30A6NM36 301 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 KIR2DL1P43626 348 aaPredicted RBP12.3□□□□□ -0.44
SPAST-201ENST00000315285 NXPH1P58417 271 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 SP6Q3SY56 376 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 CDC20BQ86Y33 519 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 DECR2Q9NUI1 292 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 PCOLCE2Q9UKZ9 415 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 CABIN1Q9Y6J0 2220 aa12.3□□□□□ -0.44
SPAST-201ENST00000315285 C9orf170A2RU37 121 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 TERTO14746 1132 aaKnown RBP12.29□□□□□ -0.44
SPAST-201ENST00000315285 SELENOPP49908 381 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 OR2B8PP59922 312 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 OR10P1Q8NGE3 313 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 RAB18Q9NP72 206 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 RCL1Q9Y2P8 373 aaKnown RBP12.29□□□□□ -0.44
SPAST-201ENST00000315285 ZNF727A8MUV8 499 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 PPP5D1E7EU14 171 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 CXCL3P19876 107 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 RAB4AP20338 218 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 PEBP1P30086 187 aaKnown RBP12.29□□□□□ -0.44
SPAST-201ENST00000315285 LRRTM1Q86UE6 522 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 GREB1LQ9C091 1923 aaPredicted RBP12.29□□□□□ -0.44
SPAST-201ENST00000315285 F6UZH7 168 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 UQCC3Q6UW78 93 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 KCNK15Q9H427 330 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 SCN3AQ9NY46 2000 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 GREM1O60565 184 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 SFT2D2O95562 160 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 SEMG1P04279 462 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms