RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 SLC37A1P57057 533 aa12.04□□□□□ -0.48
RFFL-201ENST00000315249 NUDCD2Q8WVJ2 157 aa12.04□□□□□ -0.48
RFFL-201ENST00000315249 LIN7CQ9NUP9 197 aaKnown RBP12.04□□□□□ -0.48
RFFL-201ENST00000315249 TBPP20226 339 aa12.04□□□□□ -0.48
RFFL-201ENST00000315249 AKAP6Q13023 2319 aa12.04□□□□□ -0.48
RFFL-201ENST00000315249 DRAM2Q6UX65 266 aa12.04□□□□□ -0.48
RFFL-201ENST00000315249 OR14K1Q8NGZ2 314 aa12.04□□□□□ -0.48
RFFL-201ENST00000315249 PTPMT1Q8WUK0 201 aaPredicted RBP12.04□□□□□ -0.48
RFFL-201ENST00000315249 DNASE2BQ8WZ79 361 aa12.04□□□□□ -0.48
RFFL-201ENST00000315249 CMTM3Q96MX0 182 aa12.04□□□□□ -0.48
RFFL-201ENST00000315249 MOGAT1Q96PD6 335 aa12.04□□□□□ -0.48
RFFL-201ENST00000315249 ISYNA1Q9NPH2 558 aa12.04□□□□□ -0.48
RFFL-201ENST00000315249 NTMQ9P121 344 aa12.04□□□□□ -0.48
RFFL-201ENST00000315249 PCOLCE2Q9UKZ9 415 aa12.04□□□□□ -0.48
RFFL-201ENST00000315249 A1L4Q6 167 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 ELLP55199 621 aaPredicted RBP12.03□□□□□ -0.48
RFFL-201ENST00000315249 CSRP2Q16527 193 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 C1orf185Q5T7R7 199 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 GATA6Q92908 595 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 C10orf90Q96M02 699 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 SLC25A19Q9HC21 320 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 DLL4Q9NR61 685 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 PATJQ8NI35 1801 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 HNF1AP20823 631 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 OR3A4PP47883 348 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 HIKESHIQ53FT3 197 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 LYG1Q8N1E2 194 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 WDR34Q96EX3 536 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 ARV1Q9H2C2 271 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 FAM157AC9JC47 383 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 GOSR1O95249 250 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 PI3P19957 117 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 THBS4P35443 961 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 MLF1P58340 268 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 FAM74A1Q5RGS3 127 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 AP1S3Q96PC3 154 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 UCN2Q96RP3 112 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 DDA1Q9BW61 102 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 RPS10P5Q9NQ39 176 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 A0A1W2PPV9 198 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 ZNF701M0R085 212 aaPredicted RBP12.03□□□□□ -0.48
RFFL-201ENST00000315249 SELENOPP49908 381 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 DBPQ10586 325 aaPredicted RBP12.03□□□□□ -0.48
RFFL-201ENST00000315249 BAMBIQ13145 260 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 CD226Q15762 336 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 TSEN54Q7Z6J9 526 aaKnown RBP12.03□□□□□ -0.48
RFFL-201ENST00000315249 SIGLEC7Q9Y286 467 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 CACNA1BQ00975 2339 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 FHL5Q5TD97 284 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 TMEM65Q6PI78 240 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 CPNE5Q9HCH3 593 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 K7EQM0 130 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 RPS19P39019 145 aaKnown RBP12.03□□□□□ -0.48
RFFL-201ENST00000315249 WNT3P56703 355 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 CDK5R1Q15078 307 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 C20orf196Q8IYI0 205 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 MOB3AQ96BX8 217 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 PELI1Q96FA3 418 aa12.03□□□□□ -0.48
RFFL-201ENST00000315249 CHATP28329 748 aa12.02□□□□□ -0.48
RFFL-201ENST00000315249 STAC2Q6ZMT1 411 aa12.02□□□□□ -0.48
RFFL-201ENST00000315249 OR2M2Q96R28 347 aa12.02□□□□□ -0.48
RFFL-201ENST00000315249 GABARAPL3Q9BY60 117 aa12.02□□□□□ -0.48
RFFL-201ENST00000315249 F6UZH7 168 aa12.02□□□□□ -0.48
RFFL-201ENST00000315249 CSN1S1P47710 185 aa12.02□□□□□ -0.48
RFFL-201ENST00000315249 CTU2Q2VPK5 515 aaKnown RBP12.02□□□□□ -0.48
RFFL-201ENST00000315249 OR8B3Q8NGG8 313 aa12.02□□□□□ -0.48
RFFL-201ENST00000315249 OR8B2Q96RD0 313 aa12.02□□□□□ -0.48
RFFL-201ENST00000315249 C20orf85Q9H1P6 137 aa12.02□□□□□ -0.48
RFFL-201ENST00000315249 BOLA2-SMG1P6H3BVE0 249 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 CCSO14618 274 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 AKR7A2O43488 359 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 SSSCA1O60232 199 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 EPPINO95925 133 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 TPBGQ13641 420 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 KIAA0040Q15053 153 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 OR52I2Q8NH67 350 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 PP6455Q8WZ26 134 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 NGFP01138 241 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 NKX2-1P43699 371 aaPredicted RBP12.02□□□□□ -0.49
RFFL-201ENST00000315249 MPPED2Q15777 294 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 ZNF141Q15928 474 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 CORO2AQ92828 525 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 ZFP92A6NM28 416 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 FADS1O60427 444 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 S100A12P80511 92 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 ZNF85Q03923 595 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 OR4Q3Q8NH05 313 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 GREB1Q4ZG55 1949 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 GDF9O60383 454 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 IAPPP10997 89 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 COMMD7Q86VX2 200 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 VSTM2LQ96N03 204 aa12.02□□□□□ -0.49
RFFL-201ENST00000315249 ERRFI1Q9UJM3 462 aaPredicted RBP12.02□□□□□ -0.49
RFFL-201ENST00000315249 SH2D5Q6ZV89 423 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 TSPAN32Q96QS1 320 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 CXXC4Q9H2H0 198 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 ANK1P16157 1881 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 M0R1X1 148 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 MPGP29372 298 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 HRH1P35367 487 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms