RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 SELLP14151 372 aa10.08□□□□□ -0.8
SCFD1-201ENST00000311943 ADRA2CP18825 462 aa10.08□□□□□ -0.8
SCFD1-201ENST00000311943 AMY2BP19961 511 aa10.08□□□□□ -0.8
SCFD1-201ENST00000311943 SRP9P49458 86 aaKnown RBP10.08□□□□□ -0.8
SCFD1-201ENST00000311943 CDONQ4KMG0 1287 aa10.08□□□□□ -0.8
SCFD1-201ENST00000311943 MOB3CQ70IA8 216 aa10.08□□□□□ -0.8
SCFD1-201ENST00000311943 LRRC28Q86X40 367 aaPredicted RBP10.08□□□□□ -0.8
SCFD1-201ENST00000311943 OR1M1Q8NGA1 313 aa10.08□□□□□ -0.8
SCFD1-201ENST00000311943 OR5P3Q8WZ94 311 aa10.08□□□□□ -0.8
SCFD1-201ENST00000311943 ALG8Q9BVK2 526 aa10.08□□□□□ -0.8
SCFD1-201ENST00000311943 SNTG1Q9NSN8 517 aa10.08□□□□□ -0.8
SCFD1-201ENST00000311943 HIF1ANQ9NWT6 349 aa10.08□□□□□ -0.8
SCFD1-201ENST00000311943 ERVK13-1Q9NX77 482 aa10.08□□□□□ -0.8
SCFD1-201ENST00000311943 ANKRD61A6NGH8 418 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 TRAPPC2LH3BP13 241 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 GMDSO60547 372 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 RGS9O75916 674 aaPredicted RBP10.07□□□□□ -0.8
SCFD1-201ENST00000311943 CR1LQ2VPA4 569 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 ZNF829Q3KNS6 432 aaPredicted RBP10.07□□□□□ -0.8
SCFD1-201ENST00000311943 FAM120AOSQ5T036 256 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 MEDAGQ5VYS4 303 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 KCTD8Q6ZWB6 473 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 ACBD7Q8N6N7 88 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 TRMT10AQ8TBZ6 339 aaKnown RBP10.07□□□□□ -0.8
SCFD1-201ENST00000311943 RAB1CQ92928 201 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 ORAI1Q96D31 301 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 RNF170Q96K19 258 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 SMURF1Q9HCE7 757 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 A0A0U1RQV5 110 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 CRLF1O75462 422 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 IGHA1P01876 353 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 APOC1P02654 83 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 GYPAP02724 150 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 DCTDP32321 178 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 CAPGP40121 348 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 GATA4P43694 442 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 GZMKP49863 264 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 PRB3Q04118 309 aaPredicted RBP10.07□□□□□ -0.8
SCFD1-201ENST00000311943 FAHD2BQ6P2I3 314 aaPredicted RBP10.07□□□□□ -0.8
SCFD1-201ENST00000311943 WDR82Q6UXN9 313 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 ANGPTL5Q86XS5 388 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 ZFP41Q8N8Y5 198 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 LINC01356Q8N9X3 169 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 SEMA6DQ8NFY4 1073 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 OR2G2Q8NGZ5 317 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 LRRC29Q8WV35 223 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 TFAP2CQ92754 450 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 GGHQ92820 318 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 ADAT3Q96EY9 351 aaPredicted RBP10.07□□□□□ -0.8
SCFD1-201ENST00000311943 FAHD2AQ96GK7 314 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 PDCD1LG2Q9BQ51 273 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 SNX5Q9Y5X3 404 aa10.07□□□□□ -0.8
SCFD1-201ENST00000311943 SOX21Q9Y651 276 aaPredicted RBP10.07□□□□□ -0.8
SCFD1-201ENST00000311943 IGKV1-27A0A075B6S5 117 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 PPIAL4EA0A075B759 164 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 ZNF732B4DXR9 585 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 PPIAL4DF5H284 164 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 SYNGR1O43759 233 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 PTBP3O95758 552 aaKnown RBP10.06□□□□□ -0.8
SCFD1-201ENST00000311943 MSMBP08118 114 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 PPIAL4FP0DN26 164 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 CALCBP10092 127 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 C21orf33P30042 268 aaPredicted RBP10.06□□□□□ -0.8
SCFD1-201ENST00000311943 UBE2V2Q15819 145 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 FAM166AQ6J272 317 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 THAP5Q7Z6K1 395 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 FAM90A1Q86YD7 464 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 PLPP7Q8NBV4 271 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 SCCPDHQ8NBX0 429 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 BPIFB6Q8NFQ5 453 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 OR13C5Q8NGS8 318 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 TIMD4Q96H15 378 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 PPIAL4AQ9Y536 164 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 V9GYS6 101 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 LOC105371242A0A075B767 164 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 LOC107986453A0A1B0GWG9 222 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 PHYHO14832 338 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 DHRS3O75911 302 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 PLATP00750 562 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 CST4P01036 141 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 WNT2P09544 360 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 GNALP38405 381 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 DDOSTP39656 456 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 DLX1P56177 255 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 GALEQ14376 348 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 CALHM1Q8IU99 346 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 PACRGLQ8N7B6 248 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 C22orf15Q8WYQ4 148 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 C1orf159Q96HA4 380 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 MNTQ99583 582 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 RGCCQ9H4X1 137 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 PATZ1Q9HBE1 687 aaKnown RBP10.06□□□□□ -0.8
SCFD1-201ENST00000311943 PAK1IP1Q9NWT1 392 aaPredicted RBP10.06□□□□□ -0.8
SCFD1-201ENST00000311943 ERVK-18Q9QC07 812 aa10.06□□□□□ -0.8
SCFD1-201ENST00000311943 ZNF816-ZNF321PA0A0X1KG74 233 aa10.05□□□□□ -0.8
SCFD1-201ENST00000311943 PNMA8CA0A1B0GUJ8 204 aa10.05□□□□□ -0.8
SCFD1-201ENST00000311943 F8VVB4 439 aa10.05□□□□□ -0.8
SCFD1-201ENST00000311943 F8VWA3 439 aa10.05□□□□□ -0.8
SCFD1-201ENST00000311943 SULT1C4O75897 302 aa10.05□□□□□ -0.8
SCFD1-201ENST00000311943 ATP6V1G2O95670 118 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 206.1 ms