RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 CLVS2Q5SYC1 327 aa16.69■□□□□ 0.26
VEGFB-201ENST00000309422 TMEM244Q5VVB8 128 aa16.69■□□□□ 0.26
VEGFB-201ENST00000309422 SYS1Q8N2H4 156 aa16.69■□□□□ 0.26
VEGFB-201ENST00000309422 OR1M1Q8NGA1 313 aa16.69■□□□□ 0.26
VEGFB-201ENST00000309422 APH1BQ8WW43 257 aa16.69■□□□□ 0.26
VEGFB-201ENST00000309422 RORBQ92753 470 aa16.69■□□□□ 0.26
VEGFB-201ENST00000309422 ITPKCQ96DU7 683 aa16.69■□□□□ 0.26
VEGFB-201ENST00000309422 RNF170Q96K19 258 aa16.69■□□□□ 0.26
VEGFB-201ENST00000309422 SOX7Q9BT81 388 aa16.69■□□□□ 0.26
VEGFB-201ENST00000309422 BEX2Q9BXY8 128 aa16.69■□□□□ 0.26
VEGFB-201ENST00000309422 COMMD4Q9H0A8 199 aa16.69■□□□□ 0.26
VEGFB-201ENST00000309422 TMEM160Q9NX00 188 aa16.69■□□□□ 0.26
VEGFB-201ENST00000309422 MIOXQ9UGB7 285 aa16.69■□□□□ 0.26
VEGFB-201ENST00000309422 SLC22A13Q9Y226 551 aa16.69■□□□□ 0.26
VEGFB-201ENST00000309422 TRAV38-1A0A0B4J264 116 aa16.68■□□□□ 0.26
VEGFB-201ENST00000309422 H0YJX3 145 aa16.68■□□□□ 0.26
VEGFB-201ENST00000309422 J3QRE1 110 aa16.68■□□□□ 0.26
VEGFB-201ENST00000309422 IGHA1P01876 353 aa16.68■□□□□ 0.26
VEGFB-201ENST00000309422 CCDC159P0C7I6 412 aa16.68■□□□□ 0.26
VEGFB-201ENST00000309422 FAHP16930 419 aa16.68■□□□□ 0.26
VEGFB-201ENST00000309422 PSMB10P40306 273 aa16.68■□□□□ 0.26
VEGFB-201ENST00000309422 HSPA13P48723 471 aa16.68■□□□□ 0.26
VEGFB-201ENST00000309422 GBX2P52951 348 aaPredicted RBP16.68■□□□□ 0.26
VEGFB-201ENST00000309422 ZMYND11Q15326 602 aa16.68■□□□□ 0.26
VEGFB-201ENST00000309422 MPPED2Q15777 294 aa16.68■□□□□ 0.26
VEGFB-201ENST00000309422 WDR38Q5JTN6 314 aa16.68■□□□□ 0.26
VEGFB-201ENST00000309422 CEP78Q5JTW2 689 aa16.68■□□□□ 0.26
VEGFB-201ENST00000309422 MOB3CQ70IA8 216 aa16.68■□□□□ 0.26
VEGFB-201ENST00000309422 LHFPL3Q86UP9 236 aa16.68■□□□□ 0.26
VEGFB-201ENST00000309422 LRRC28Q86X40 367 aaPredicted RBP16.68■□□□□ 0.26
VEGFB-201ENST00000309422 OR8B3Q8NGG8 313 aa16.68■□□□□ 0.26
VEGFB-201ENST00000309422 OR52I1Q8NGK6 324 aa16.68■□□□□ 0.26
VEGFB-201ENST00000309422 TMEM186Q96B77 213 aa16.68■□□□□ 0.26
VEGFB-201ENST00000309422 TECTBQ96PL2 329 aa16.68■□□□□ 0.26
VEGFB-201ENST00000309422 OR8B2Q96RD0 313 aa16.68■□□□□ 0.26
VEGFB-201ENST00000309422 NEK6Q9HC98 313 aa16.68■□□□□ 0.26
VEGFB-201ENST00000309422 MRPS18AQ9NVS2 196 aaKnown RBP16.68■□□□□ 0.26
VEGFB-201ENST00000309422 DCAF16Q9NXF7 216 aa16.68■□□□□ 0.26
VEGFB-201ENST00000309422 NKX1-2Q9UD57 310 aaPredicted RBP16.68■□□□□ 0.26
VEGFB-201ENST00000309422 SLC7A11Q9UPY5 501 aa16.68■□□□□ 0.26
VEGFB-201ENST00000309422 EXOSC1Q9Y3B2 195 aaKnown RBP16.68■□□□□ 0.26
VEGFB-201ENST00000309422 TEP1Q99973 2627 aaKnown RBP16.67■□□□□ 0.26
VEGFB-201ENST00000309422 A0A0G2JMP0 313 aa16.67■□□□□ 0.26
VEGFB-201ENST00000309422 A0A0X1KG70 313 aa16.67■□□□□ 0.26
VEGFB-201ENST00000309422 EFCAB10A6NFE3 127 aa16.67■□□□□ 0.26
VEGFB-201ENST00000309422 WNT9BO14905 357 aa16.67■□□□□ 0.26
VEGFB-201ENST00000309422 FSTL3O95633 263 aa16.67■□□□□ 0.26
VEGFB-201ENST00000309422 NRASP01111 189 aa16.67■□□□□ 0.26
VEGFB-201ENST00000309422 IGLV3-1P01715 115 aa16.67■□□□□ 0.26
VEGFB-201ENST00000309422 ZNF20P17024 532 aa16.67■□□□□ 0.26
VEGFB-201ENST00000309422 OR12D2P58182 307 aa16.67■□□□□ 0.26
VEGFB-201ENST00000309422 CEACAM21Q3KPI0 293 aa16.67■□□□□ 0.26
VEGFB-201ENST00000309422 ZNF676Q8N7Q3 588 aa16.67■□□□□ 0.26
VEGFB-201ENST00000309422 OR4M2Q8NGB6 313 aa16.67■□□□□ 0.26
VEGFB-201ENST00000309422 OR5P3Q8WZ94 311 aa16.67■□□□□ 0.26
VEGFB-201ENST00000309422 C1orf159Q96HA4 380 aa16.67■□□□□ 0.26
VEGFB-201ENST00000309422 HIF1ANQ9NWT6 349 aa16.67■□□□□ 0.26
VEGFB-201ENST00000309422 ERVK13-1Q9NX77 482 aa16.67■□□□□ 0.26
VEGFB-201ENST00000309422 OR5V1Q9UGF6 321 aa16.67■□□□□ 0.26
VEGFB-201ENST00000309422 LOC107986453A0A1B0GWG9 222 aa16.66■□□□□ 0.26
VEGFB-201ENST00000309422 OOEPA6NGQ2 149 aa16.66■□□□□ 0.26
VEGFB-201ENST00000309422 WBP4O75554 376 aaKnown RBP16.66■□□□□ 0.26
VEGFB-201ENST00000309422 ZNF205O95201 554 aa16.66■□□□□ 0.26
VEGFB-201ENST00000309422 GPM6AP51674 278 aa16.66■□□□□ 0.26
VEGFB-201ENST00000309422 LMO4P61968 165 aa16.66■□□□□ 0.26
VEGFB-201ENST00000309422 ZNF154Q13106 437 aa16.66■□□□□ 0.26
VEGFB-201ENST00000309422 SCGB2A2Q13296 93 aa16.66■□□□□ 0.26
VEGFB-201ENST00000309422 CNN3Q15417 329 aaKnown RBP16.66■□□□□ 0.26
VEGFB-201ENST00000309422 DCDC5Q6ZRR9 648 aa16.66■□□□□ 0.26
VEGFB-201ENST00000309422 OR5A2Q8NGI9 324 aa16.66■□□□□ 0.26
VEGFB-201ENST00000309422 OR2G2Q8NGZ5 317 aa16.66■□□□□ 0.26
VEGFB-201ENST00000309422 LRRC29Q8WV35 223 aa16.66■□□□□ 0.26
VEGFB-201ENST00000309422 C10orf35Q96D05 121 aa16.66■□□□□ 0.26
VEGFB-201ENST00000309422 PATZ1Q9HBE1 687 aaKnown RBP16.66■□□□□ 0.26
VEGFB-201ENST00000309422 MYRFQ9Y2G1 1151 aa16.66■□□□□ 0.26
VEGFB-201ENST00000309422 LRCH1Q9Y2L9 728 aa16.66■□□□□ 0.26
VEGFB-201ENST00000309422 V9GYS6 101 aa16.66■□□□□ 0.26
VEGFB-201ENST00000309422 HIVEP2P31629 2446 aa16.66■□□□□ 0.26
VEGFB-201ENST00000309422 ANKRD61A6NGH8 418 aa16.65■□□□□ 0.26
VEGFB-201ENST00000309422 CEACAM18A8MTB9 384 aa16.65■□□□□ 0.26
VEGFB-201ENST00000309422 ZNF732B4DXR9 585 aa16.65■□□□□ 0.26
VEGFB-201ENST00000309422 C3orf80F5H4A9 247 aa16.65■□□□□ 0.26
VEGFB-201ENST00000309422 LGALS8O00214 317 aa16.65■□□□□ 0.26
VEGFB-201ENST00000309422 NDUFA2O43678 99 aa16.65■□□□□ 0.26
VEGFB-201ENST00000309422 CCL1P22362 96 aa16.65■□□□□ 0.26
VEGFB-201ENST00000309422 GATA3P23771 443 aa16.65■□□□□ 0.26
VEGFB-201ENST00000309422 CCR9P51686 369 aa16.65■□□□□ 0.26
VEGFB-201ENST00000309422 ISL1P61371 349 aa16.65■□□□□ 0.26
VEGFB-201ENST00000309422 SMN1Q16637 294 aaKnown RBP16.65■□□□□ 0.26
VEGFB-201ENST00000309422 MICBQ29980 383 aa16.65■□□□□ 0.26
VEGFB-201ENST00000309422 ZNF404Q494X3 552 aa16.65■□□□□ 0.26
VEGFB-201ENST00000309422 STX19Q8N4C7 294 aa16.65■□□□□ 0.26
VEGFB-201ENST00000309422 PPP1R14AQ96A00 147 aa16.65■□□□□ 0.26
VEGFB-201ENST00000309422 NEIL1Q96FI4 390 aaPredicted RBP16.65■□□□□ 0.26
VEGFB-201ENST00000309422 TMEM80Q96HE8 168 aa16.65■□□□□ 0.26
VEGFB-201ENST00000309422 FGF20Q9NP95 211 aaPredicted RBP16.65■□□□□ 0.26
VEGFB-201ENST00000309422 DNAJB11Q9UBS4 358 aa16.65■□□□□ 0.26
VEGFB-201ENST00000309422 HHLA2Q9UM44 414 aa16.65■□□□□ 0.26
VEGFB-201ENST00000309422 CR1P17927 2039 aa16.65■□□□□ 0.26
VEGFB-201ENST00000309422 TMEM212A6NML5 194 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms