RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 PDGFBP01127 241 aaPredicted RBP10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 IFNA17P01571 189 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 CRYAAP02489 173 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 LIFP15018 202 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 RAB6AP20340 208 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 EDDM3BP56851 147 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 NANOS3P60323 173 aaKnown RBP10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 TSC22D1Q15714 1073 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 HSD17B6O14756 317 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 OR2F2O95006 317 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 ZIC2O95409 532 aaPredicted RBP10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 TXNDC12O95881 172 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 OR2F1Q13607 317 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 GSG1Q2KHT4 349 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 OR51A4Q8NGJ6 313 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 OR51H1Q8NH63 302 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 RNF141Q8WVD5 230 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 RNF133Q8WVZ7 376 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 ARHGAP5-AS1Q96IT6 56 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 UCN2Q96RP3 112 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 PRDM6Q9NQX0 595 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 PLXNA3P51805 1871 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 MTCL1Q9Y4B5 1905 aaKnown RBP10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 DCTN6O00399 190 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 PLA2G10O15496 165 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 HLA-HP01893 362 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 FGF5P12034 268 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 HIST1H1DP16402 221 aaKnown RBP10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 SELENOPP49908 381 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 RAB31Q13636 194 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 ZNF687Q8N1G0 1237 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 OR4D6Q8NGJ1 314 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 OR5M9Q8NGP3 310 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 ASB5Q8WWX0 329 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 RAB39BQ96DA2 213 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 CCDC86Q9H6F5 360 aaKnown RBP10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 KLHDC2Q9Y2U9 406 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 CSAG2Q9Y5P2 127 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 ST8SIA3O43173 380 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 SPINT2O43291 252 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 TNFSF12O43508 249 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 SDHBP21912 280 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 MMP16P51512 607 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 MLF1P58340 268 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 ST3GAL2Q16842 350 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 C17orf107Q6ZR85 190 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 NLRC3Q7RTR2 1065 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 MRGPREQ86SM8 312 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 ABHD5Q8WTS1 349 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 SLAMF9Q96A28 289 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 OPA3Q9H6K4 179 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 FBXO7Q9Y3I1 522 aa10.14□□□□□ -0.79
PCDHGC3-201ENST00000308177 SEMA7AO75326 666 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 IGKV3-11P04433 115 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 GLAP06280 429 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 FABP6P51161 128 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 RPP30P78346 268 aaKnown RBP10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 SPATA46Q5T0L3 261 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 ACOT7LQ6ZUV0 252 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 APOBEC4Q8WW27 367 aaKnown RBP10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 KCNK15Q9H427 330 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 PLEKHF2Q9H8W4 249 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 ANKRD20A5PA0PJZ0 165 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 SH2D1BO14796 132 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 CTDSPLO15194 276 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 NUPL2O15504 423 aaKnown RBP10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 RGS11O94810 467 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 CELA2AP08217 269 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 NME2P22392 152 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 S100A2P29034 98 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 PXT1Q8NFP0 134 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 OR56B2PQ8NGI1 322 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 PLK3Q9H4B4 646 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 KRBOX1C9JBD0 128 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 SIRPB1O00241 398 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 THY1P04216 161 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 OR3A4PP47883 348 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 ZP4Q12836 540 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 CLINT1Q14677 625 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 PEA15Q15121 130 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 GCNT2Q8N0V5 402 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 HSD17B11Q8NBQ5 300 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 ST8SIA4Q92187 359 aa10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 ZC3HAV1LQ96H79 300 aaKnown RBP10.13□□□□□ -0.79
PCDHGC3-201ENST00000308177 KLK10O43240 276 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 GSTZ1O43708 216 aaPredicted RBP10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 FUT3P21217 361 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 RPS23P62266 143 aaKnown RBP10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 ZNF718Q3SXZ3 478 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 TMEM128Q5BJH2 165 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 ZNF610Q8N9Z0 462 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 ZNF680Q8NEM1 530 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 DMBX1Q8NFW5 382 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 WDR89Q96FK6 387 aaPredicted RBP10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 LIN37Q96GY3 246 aaPredicted RBP10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 QPCTLQ9NXS2 382 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 KIF25Q9UIL4 384 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 RPA2P15927 270 aa10.12□□□□□ -0.79
PCDHGC3-201ENST00000308177 TUBG1P23258 451 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms