RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 AKR7A2O43488 359 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 IFNA14P01570 189 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 HLA-DQA2P01906 255 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 ARG1P05089 322 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 TROVE2P10155 538 aaKnown RBP eCLIP9.45□□□□□ -0.9
SMIM4-201ENST00000307106 SLC2A1P11166 492 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 CHATP28329 748 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 OTX1P32242 354 aaPredicted RBP9.45□□□□□ -0.9
SMIM4-201ENST00000307106 GNALP38405 381 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 IDH3AP50213 366 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 RPS6KA3P51812 740 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 SLC25A1P53007 311 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 ERVFRD-1P60508 538 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 VSNL1P62760 191 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 SPIBQ01892 262 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 CYBRD1Q53TN4 286 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 TNFAIP8L3Q5GJ75 292 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 ZFAND6Q6FIF0 208 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 KCTD18Q6PI47 426 aaPredicted RBP9.45□□□□□ -0.9
SMIM4-201ENST00000307106 TBPL2Q6SJ96 375 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 ZNF782Q6ZMW2 699 aaPredicted RBP9.45□□□□□ -0.9
SMIM4-201ENST00000307106 CPLX4Q7Z7G2 160 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 CYB561A3Q8NBI2 242 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 OR52H1Q8NGJ2 320 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 RPL3LQ92901 407 aaKnown RBP9.45□□□□□ -0.9
SMIM4-201ENST00000307106 ZBTB9Q96C00 473 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 PPP1R3EQ9H7J1 279 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.45□□□□□ -0.9
SMIM4-201ENST00000307106 NLKQ9UBE8 527 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 SIGLEC7Q9Y286 467 aa9.45□□□□□ -0.9
SMIM4-201ENST00000307106 TMEM120BA0PK00 339 aa9.44□□□□□ -0.9
SMIM4-201ENST00000307106 XRCC2O43543 280 aa9.44□□□□□ -0.9
SMIM4-201ENST00000307106 PTP4A3O75365 173 aa9.44□□□□□ -0.9
SMIM4-201ENST00000307106 TXNDC12O95881 172 aa9.44□□□□□ -0.9
SMIM4-201ENST00000307106 CCL3L1P16619 93 aa9.44□□□□□ -0.9
SMIM4-201ENST00000307106 AZGP1P25311 298 aaKnown RBP9.44□□□□□ -0.9
SMIM4-201ENST00000307106 DYNLT3P51808 116 aa9.44□□□□□ -0.9
SMIM4-201ENST00000307106 SLC7A2P52569 658 aa9.44□□□□□ -0.9
SMIM4-201ENST00000307106 CAPZA1P52907 286 aa9.44□□□□□ -0.9
SMIM4-201ENST00000307106 LRRC23Q53EV4 343 aaPredicted RBP9.44□□□□□ -0.9
SMIM4-201ENST00000307106 LDLRAD2Q5SZI1 272 aa9.44□□□□□ -0.9
SMIM4-201ENST00000307106 ADAMTSL5Q6ZMM2 481 aa9.44□□□□□ -0.9
SMIM4-201ENST00000307106 RRM2BQ7LG56 351 aa9.44□□□□□ -0.9
SMIM4-201ENST00000307106 SLC16A9Q7RTY1 509 aa9.44□□□□□ -0.9
SMIM4-201ENST00000307106 PIGWQ7Z7B1 504 aa9.44□□□□□ -0.9
SMIM4-201ENST00000307106 SPSB4Q96A44 273 aa9.44□□□□□ -0.9
SMIM4-201ENST00000307106 FAM46AQ96IP4 442 aaKnown RBP9.44□□□□□ -0.9
SMIM4-201ENST00000307106 LYZL4Q96KX0 146 aa9.44□□□□□ -0.9
SMIM4-201ENST00000307106 MICU1Q9BPX6 476 aa9.44□□□□□ -0.9
SMIM4-201ENST00000307106 CCDC28BQ9BUN5 200 aa9.44□□□□□ -0.9
SMIM4-201ENST00000307106 NSRP1Q9H0G5 558 aaKnown RBP9.44□□□□□ -0.9
SMIM4-201ENST00000307106 USE1Q9NZ43 259 aa9.44□□□□□ -0.9
SMIM4-201ENST00000307106 LRP12Q9Y561 859 aa9.44□□□□□ -0.9
SMIM4-201ENST00000307106 SNX13Q9Y5W8 968 aa9.44□□□□□ -0.9
SMIM4-201ENST00000307106 IGKV1D-17A0A075B6S4 117 aa9.43□□□□□ -0.9
SMIM4-201ENST00000307106 ANXA2P2A6NMY6 339 aa9.43□□□□□ -0.9
SMIM4-201ENST00000307106 FFAR1O14842 300 aa9.43□□□□□ -0.9
SMIM4-201ENST00000307106 RENP00797 406 aa9.43□□□□□ -0.9
SMIM4-201ENST00000307106 LPLP06858 475 aa9.43□□□□□ -0.9
SMIM4-201ENST00000307106 JUNBP17275 347 aaPredicted RBP9.43□□□□□ -0.9
SMIM4-201ENST00000307106 GLRA1P23415 457 aa9.43□□□□□ -0.9
SMIM4-201ENST00000307106 RPS27P42677 84 aaKnown RBP9.43□□□□□ -0.9
SMIM4-201ENST00000307106 PRKXP51817 358 aa9.43□□□□□ -0.9
SMIM4-201ENST00000307106 RPL31P62899 125 aaKnown RBP9.43□□□□□ -0.9
SMIM4-201ENST00000307106 SELENOWP63302 87 aa9.43□□□□□ -0.9
SMIM4-201ENST00000307106 FAM3AP98173 230 aa9.43□□□□□ -0.9
SMIM4-201ENST00000307106 AGBL2Q5U5Z8 902 aa9.43□□□□□ -0.9
SMIM4-201ENST00000307106 TMEM200BQ69YZ2 307 aa9.43□□□□□ -0.9
SMIM4-201ENST00000307106 DPY19L2P2Q6ZN68 376 aa9.43□□□□□ -0.9
SMIM4-201ENST00000307106 NMNAT3Q96T66 252 aa9.43□□□□□ -0.9
SMIM4-201ENST00000307106 RTL8AQ9BWD3 113 aa9.43□□□□□ -0.9
SMIM4-201ENST00000307106 PAPOLGQ9BWT3 736 aaKnown RBP9.43□□□□□ -0.9
SMIM4-201ENST00000307106 RPRD1BQ9NQG5 326 aaKnown RBP9.43□□□□□ -0.9
SMIM4-201ENST00000307106 MRPL22Q9NWU5 206 aaKnown RBP9.43□□□□□ -0.9
SMIM4-201ENST00000307106 TMEM5Q9Y2B1 443 aa9.43□□□□□ -0.9
SMIM4-201ENST00000307106 ODF3BA8MYP8 253 aa9.42□□□□□ -0.9
SMIM4-201ENST00000307106 H3BUI4 141 aa9.42□□□□□ -0.9
SMIM4-201ENST00000307106 TBX1O43435 398 aa9.42□□□□□ -0.9
SMIM4-201ENST00000307106 PSG2P11465 335 aa9.42□□□□□ -0.9
SMIM4-201ENST00000307106 ZNF823P16415 610 aa9.42□□□□□ -0.9
SMIM4-201ENST00000307106 CEBPDP49716 269 aaPredicted RBP9.42□□□□□ -0.9
SMIM4-201ENST00000307106 OR12D2P58182 307 aa9.42□□□□□ -0.9
SMIM4-201ENST00000307106 FXYD6P3P58550 94 aa9.42□□□□□ -0.9
SMIM4-201ENST00000307106 TIGD6Q17RP2 521 aa9.42□□□□□ -0.9
SMIM4-201ENST00000307106 ABCA11PQ4W5N1 156 aa9.42□□□□□ -0.9
SMIM4-201ENST00000307106 ZNF626Q68DY1 528 aa9.42□□□□□ -0.9
SMIM4-201ENST00000307106 C8orf86Q6ZUL3 223 aa9.42□□□□□ -0.9
SMIM4-201ENST00000307106 C16orf82Q7Z2V1 217 aa9.42□□□□□ -0.9
SMIM4-201ENST00000307106 ZBTB46Q86UZ6 589 aa9.42□□□□□ -0.9
SMIM4-201ENST00000307106 ZDHHC21Q8IVQ6 265 aa9.42□□□□□ -0.9
SMIM4-201ENST00000307106 OR4C15Q8NGM1 316 aa9.42□□□□□ -0.9
SMIM4-201ENST00000307106 RSRC1Q96IZ7 334 aaKnown RBP9.42□□□□□ -0.9
SMIM4-201ENST00000307106 ERMAPQ96PL5 475 aaPredicted RBP9.42□□□□□ -0.9
SMIM4-201ENST00000307106 KCNJ15Q99712 375 aa9.42□□□□□ -0.9
SMIM4-201ENST00000307106 COPS4Q9BT78 406 aa9.42□□□□□ -0.9
SMIM4-201ENST00000307106 FN3KQ9H479 309 aa9.42□□□□□ -0.9
SMIM4-201ENST00000307106 RABEP2Q9H5N1 569 aa9.42□□□□□ -0.9
SMIM4-201ENST00000307106 KCNG2Q9UJ96 466 aa9.42□□□□□ -0.9
SMIM4-201ENST00000307106 ZNF222Q9UK12 451 aa9.42□□□□□ -0.9
SMIM4-201ENST00000307106 TMEM210A6NLX4 147 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms