RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 TAS2R19P59542 299 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 IGF2-ASQ6U949 168 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 CDH24Q86UP0 819 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 OR11H4Q8NGC9 324 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 OR52B4Q8NGK2 314 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 ZFAND1Q8TCF1 268 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 PIGTQ969N2 578 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 DACT3Q96B18 629 aaPredicted RBP5.7□□□□□ -1.5
USP47-201ENST00000305481 C10orf35Q96D05 121 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 MED30Q96HR3 178 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 GPER1Q99527 375 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 NUDT16L1Q9BRJ7 211 aaKnown RBP5.7□□□□□ -1.5
USP47-201ENST00000305481 TMEM246Q9BRR3 403 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 EXO5Q9H790 373 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 RNF122Q9H9V4 155 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 PARPBPQ9NWS1 579 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 EMC3Q9P0I2 261 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 ZNF222Q9UK12 451 aa5.7□□□□□ -1.5
USP47-201ENST00000305481 URB1O60287 2271 aaKnown RBP5.69□□□□□ -1.5
USP47-201ENST00000305481 IGKV1-27A0A075B6S5 117 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 LOC100509620A0A075B734 347 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 FOXI3A8MTJ6 420 aaPredicted RBP5.69□□□□□ -1.5
USP47-201ENST00000305481 ZNF587BE7ETH6 402 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 MTRF1O75570 445 aaKnown RBP5.69□□□□□ -1.5
USP47-201ENST00000305481 RAD51DO75771 328 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 RAB3DO95716 219 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 FCGR2AP12318 317 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 EDN3P14138 238 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 CPN1P15169 458 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 GSK3AP49840 483 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 PCBD1P61457 104 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 ZNF92Q03936 586 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 STK11Q15831 433 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 METTL11BQ5VVY1 283 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 OR52W1Q6IF63 320 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 TRAPPC6BQ86SZ2 158 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 LINC00469Q8N7U9 141 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 SEMA6DQ8NFY4 1073 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 KCNG3Q8TAE7 436 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 MRGPRFQ96AM1 343 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 SLC6A7Q99884 636 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 CA10Q9NS85 328 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 NPTNQ9Y639 398 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 GVINP1Q7Z2Y8 2422 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 TRGV5A0A0B4J1U4 118 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 FAM172BPA6NC97 362 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 OR14I1A6ND48 311 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 DHRS7CA6NNS2 312 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 ZNF736B4DX44 427 aaPredicted RBP5.69□□□□□ -1.5
USP47-201ENST00000305481 CRTAPO75718 401 aaPredicted RBP5.69□□□□□ -1.5
USP47-201ENST00000305481 CYB5AP00167 134 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 HLA-HP01893 362 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 IL5P05113 134 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 CHRM2P08172 466 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 FAM3AP98173 230 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 ZNF626Q68DY1 528 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 ALKBH2Q6NS38 261 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 IGFL2Q6UWQ7 119 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 RFPL4BQ6ZWI9 263 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 FAM89BQ8N5H3 189 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 OR10K1Q8NGX5 313 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 WDR89Q96FK6 387 aaPredicted RBP5.69□□□□□ -1.5
USP47-201ENST00000305481 TMEM59Q9BXS4 323 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 PRRG4Q9BZD6 226 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 DLL4Q9NR61 685 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 GPR173Q9NS66 373 aa5.69□□□□□ -1.5
USP47-201ENST00000305481 ZNF107Q9UII5 783 aaPredicted RBP5.69□□□□□ -1.5
USP47-201ENST00000305481 hCG_38984A0A1B0GV85 526 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 ANXA3P12429 323 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 RNPS1Q15287 305 aaKnown RBP5.68□□□□□ -1.5
USP47-201ENST00000305481 TMEM42Q69YG0 159 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 COLCA1Q6ZS62 124 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 TMEM178AQ8NBL3 297 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 CCDC54Q8NEL0 328 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 OR13C8Q8NGS7 320 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 APH1AQ96BI3 265 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 RAB3CQ96E17 227 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 ZNF436Q9C0F3 470 aaPredicted RBP5.68□□□□□ -1.5
USP47-201ENST00000305481 LDAHQ9H6V9 325 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 DLL3Q9NYJ7 618 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 PRSS50Q9UI38 385 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 ING4Q9UNL4 249 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 MGAQ8IWI9 3026 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 H3BUI4 141 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 FARS2O95363 451 aaKnown RBP5.68□□□□□ -1.5
USP47-201ENST00000305481 AMY2AP04746 511 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 UBBP0CG47 229 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 CCL2P13500 99 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 HIST1H1DP16402 221 aaKnown RBP5.68□□□□□ -1.5
USP47-201ENST00000305481 PRKACBP22694 351 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 NBL1P41271 181 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 SNRPD2P62316 118 aaKnown RBP5.68□□□□□ -1.5
USP47-201ENST00000305481 RPS27AP62979 156 aaKnown RBP5.68□□□□□ -1.5
USP47-201ENST00000305481 RIPPLY1Q0D2K3 151 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 CLN3Q13286 438 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 C2orf68Q2NKX9 166 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 IDO2Q6ZQW0 420 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 NLRC3Q7RTR2 1065 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 ZNF584Q8IVC4 421 aa5.68□□□□□ -1.5
USP47-201ENST00000305481 C9orf62Q8N4C0 152 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms