RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 PKP2Q99959 881 aa22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 TTTY10Q9BZA0 68 aa22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 CLN6Q9NWW5 311 aa22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 CTSZQ9UBR2 303 aa22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 WARS2Q9UGM6 360 aaKnown RBP22.01■■□□□ 1.11
CDKN2A-201ENST00000304494 ZNF816-ZNF321PA0A0X1KG74 233 aa22■■□□□ 1.11
CDKN2A-201ENST00000304494 PRR32B1ATL7 298 aa22■■□□□ 1.11
CDKN2A-201ENST00000304494 GYPAP02724 150 aa22■■□□□ 1.11
CDKN2A-201ENST00000304494 EGR3Q06889 387 aa22■■□□□ 1.11
CDKN2A-201ENST00000304494 ZFP1Q6P2D0 407 aa22■■□□□ 1.11
CDKN2A-201ENST00000304494 RBMS3Q6XE24 437 aaKnown RBP22■■□□□ 1.11
CDKN2A-201ENST00000304494 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP22■■□□□ 1.11
CDKN2A-201ENST00000304494 UPRTQ96BW1 309 aa22■■□□□ 1.11
CDKN2A-201ENST00000304494 MOB1AQ9H8S9 216 aa22■■□□□ 1.11
CDKN2A-201ENST00000304494 NUFIP1Q9UHK0 495 aaKnown RBP22■■□□□ 1.11
CDKN2A-201ENST00000304494 CDIPTO14735 213 aa21.99■■□□□ 1.11
CDKN2A-201ENST00000304494 EGR1P18146 543 aa21.99■■□□□ 1.11
CDKN2A-201ENST00000304494 POLR2IP36954 125 aaKnown RBP21.99■■□□□ 1.11
CDKN2A-201ENST00000304494 POU4F2Q12837 409 aa21.99■■□□□ 1.11
CDKN2A-201ENST00000304494 KPNB1Q14974 876 aaKnown RBP21.99■■□□□ 1.11
CDKN2A-201ENST00000304494 KCTD8Q6ZWB6 473 aa21.99■■□□□ 1.11
CDKN2A-201ENST00000304494 KRT74Q7RTS7 529 aa21.99■■□□□ 1.11
CDKN2A-201ENST00000304494 C10orf67Q8IYJ2 551 aa21.99■■□□□ 1.11
CDKN2A-201ENST00000304494 OR8J1Q8NGP2 316 aa21.99■■□□□ 1.11
CDKN2A-201ENST00000304494 C12orf43Q96C57 262 aaKnown RBP21.99■■□□□ 1.11
CDKN2A-201ENST00000304494 RNF170Q96K19 258 aa21.99■■□□□ 1.11
CDKN2A-201ENST00000304494 KAAG1Q9UBP8 84 aa21.99■■□□□ 1.11
CDKN2A-201ENST00000304494 LIPFP07098 398 aa21.98■■□□□ 1.11
CDKN2A-201ENST00000304494 HTR1FP30939 366 aa21.98■■□□□ 1.11
CDKN2A-201ENST00000304494 RIPPLY1Q0D2K3 151 aa21.98■■□□□ 1.11
CDKN2A-201ENST00000304494 C11orf91Q3C1V1 193 aa21.98■■□□□ 1.11
CDKN2A-201ENST00000304494 THAP5Q7Z6K1 395 aa21.98■■□□□ 1.11
CDKN2A-201ENST00000304494 OR51G2Q8NGK0 314 aa21.98■■□□□ 1.11
CDKN2A-201ENST00000304494 OR51E1Q8TCB6 317 aa21.98■■□□□ 1.11
CDKN2A-201ENST00000304494 FAM216AQ8WUB2 273 aa21.98■■□□□ 1.11
CDKN2A-201ENST00000304494 MS4A7Q9GZW8 240 aaPredicted RBP21.98■■□□□ 1.11
CDKN2A-201ENST00000304494 GPR84Q9NQS5 396 aa21.98■■□□□ 1.11
CDKN2A-201ENST00000304494 ZNF69Q9UC07 566 aa21.98■■□□□ 1.11
CDKN2A-201ENST00000304494 ORC6Q9Y5N6 252 aa21.98■■□□□ 1.11
CDKN2A-201ENST00000304494 ANK2Q01484 3957 aa21.97■■□□□ 1.11
CDKN2A-201ENST00000304494 IGHV3OR15-7A0A075B7D8 119 aa21.97■■□□□ 1.11
CDKN2A-201ENST00000304494 LOC110117498-PIK3R3F6TDL0 507 aa21.97■■□□□ 1.11
CDKN2A-201ENST00000304494 TMPRSS2O15393 492 aa21.97■■□□□ 1.11
CDKN2A-201ENST00000304494 MTRF1O75570 445 aaKnown RBP21.97■■□□□ 1.11
CDKN2A-201ENST00000304494 IGLV3-1P01715 115 aa21.97■■□□□ 1.11
CDKN2A-201ENST00000304494 CDC42P60953 191 aa21.97■■□□□ 1.11
CDKN2A-201ENST00000304494 FAM76BQ5HYJ3 339 aa21.97■■□□□ 1.11
CDKN2A-201ENST00000304494 ZBTB37Q5TC79 503 aa21.97■■□□□ 1.11
CDKN2A-201ENST00000304494 OR10Z1Q8NGY1 313 aa21.97■■□□□ 1.11
CDKN2A-201ENST00000304494 HPSE2Q8WWQ2 592 aa21.97■■□□□ 1.11
CDKN2A-201ENST00000304494 FAM71F1Q96KD3 344 aaPredicted RBP21.97■■□□□ 1.11
CDKN2A-201ENST00000304494 APOL4Q9BPW4 351 aa21.97■■□□□ 1.11
CDKN2A-201ENST00000304494 GTF2A1LQ9UNN4 478 aa21.97■■□□□ 1.11
CDKN2A-201ENST00000304494 R4GMQ9 66 aa21.97■■□□□ 1.11
CDKN2A-201ENST00000304494 SRRM5B3KS81 715 aa21.96■■□□□ 1.11
CDKN2A-201ENST00000304494 C22orf46C9J442 243 aa21.96■■□□□ 1.11
CDKN2A-201ENST00000304494 MFGE8Q08431 387 aaPredicted RBP21.96■■□□□ 1.11
CDKN2A-201ENST00000304494 TMED1Q13445 227 aa21.96■■□□□ 1.11
CDKN2A-201ENST00000304494 PNLDC1Q8NA58 520 aaKnown RBP21.96■■□□□ 1.11
CDKN2A-201ENST00000304494 RPL3LQ92901 407 aaKnown RBP21.96■■□□□ 1.11
CDKN2A-201ENST00000304494 RFKQ969G6 155 aa21.96■■□□□ 1.11
CDKN2A-201ENST00000304494 H3BNX3 289 aa21.95■■□□□ 1.1
CDKN2A-201ENST00000304494 EBAG9O00559 213 aa21.95■■□□□ 1.1
CDKN2A-201ENST00000304494 SRSF10O75494 262 aaKnown RBP21.95■■□□□ 1.1
CDKN2A-201ENST00000304494 ECDO95905 644 aaPredicted RBP21.95■■□□□ 1.1
CDKN2A-201ENST00000304494 TTRP02766 147 aa21.95■■□□□ 1.1
CDKN2A-201ENST00000304494 ALPLP05186 524 aa21.95■■□□□ 1.1
CDKN2A-201ENST00000304494 OR2T7P0C7T2 308 aa21.95■■□□□ 1.1
CDKN2A-201ENST00000304494 FGF12P61328 243 aa21.95■■□□□ 1.1
CDKN2A-201ENST00000304494 ACTG1P63261 375 aa21.95■■□□□ 1.1
CDKN2A-201ENST00000304494 TUSC1Q2TAM9 212 aa21.95■■□□□ 1.1
CDKN2A-201ENST00000304494 CEACAM21Q3KPI0 293 aa21.95■■□□□ 1.1
CDKN2A-201ENST00000304494 BCL2L15Q5TBC7 163 aa21.95■■□□□ 1.1
CDKN2A-201ENST00000304494 DOK3Q7L591 496 aa21.95■■□□□ 1.1
CDKN2A-201ENST00000304494 SLC36A1Q7Z2H8 476 aa21.95■■□□□ 1.1
CDKN2A-201ENST00000304494 SIGLECL1Q8N7X8 197 aa21.95■■□□□ 1.1
CDKN2A-201ENST00000304494 SCCPDHQ8NBX0 429 aa21.95■■□□□ 1.1
CDKN2A-201ENST00000304494 OR2T27Q8NH04 317 aa21.95■■□□□ 1.1
CDKN2A-201ENST00000304494 SMURF1Q9HCE7 757 aa21.95■■□□□ 1.1
CDKN2A-201ENST00000304494 ENPP5Q9UJA9 477 aa21.95■■□□□ 1.1
CDKN2A-201ENST00000304494 SNX5Q9Y5X3 404 aa21.95■■□□□ 1.1
CDKN2A-201ENST00000304494 TRAV40A0A0B4J280 105 aa21.94■■□□□ 1.1
CDKN2A-201ENST00000304494 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP21.94■■□□□ 1.1
CDKN2A-201ENST00000304494 DVL1O14640 695 aa21.94■■□□□ 1.1
CDKN2A-201ENST00000304494 DHRS3O75911 302 aa21.94■■□□□ 1.1
CDKN2A-201ENST00000304494 PLATP00750 562 aa21.94■■□□□ 1.1
CDKN2A-201ENST00000304494 KRT8P05787 483 aa21.94■■□□□ 1.1
CDKN2A-201ENST00000304494 IGHV4-38-2P0DP08 117 aa21.94■■□□□ 1.1
CDKN2A-201ENST00000304494 ATP6V1E1P36543 226 aa21.94■■□□□ 1.1
CDKN2A-201ENST00000304494 GPM6AP51674 278 aa21.94■■□□□ 1.1
CDKN2A-201ENST00000304494 GNG3P63215 75 aa21.94■■□□□ 1.1
CDKN2A-201ENST00000304494 WDR38Q5JTN6 314 aa21.94■■□□□ 1.1
CDKN2A-201ENST00000304494 C9orf139Q6ZV77 190 aa21.94■■□□□ 1.1
CDKN2A-201ENST00000304494 ZDHHC22Q8N966 263 aa21.94■■□□□ 1.1
CDKN2A-201ENST00000304494 TRUB1Q8WWH5 349 aaKnown RBP21.94■■□□□ 1.1
CDKN2A-201ENST00000304494 RASSF4Q9H2L5 321 aa21.94■■□□□ 1.1
CDKN2A-201ENST00000304494 ESM1Q9NQ30 184 aa21.94■■□□□ 1.1
CDKN2A-201ENST00000304494 IMPAD1Q9NX62 359 aa21.94■■□□□ 1.1
CDKN2A-201ENST00000304494 USE1Q9NZ43 259 aa21.94■■□□□ 1.1
CDKN2A-201ENST00000304494 DNAJB11Q9UBS4 358 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms