RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 HTR3BO95264 441 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 FTH1P19P0C7X4 201 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 CD79AP11912 226 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 PTGFRP43088 359 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 CLDN18P56856 261 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 H2BFSP57053 126 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 EIF3IQ13347 325 aaKnown RBP12.72□□□□□ -0.37
SMG8-201ENST00000300917 SUMF1Q8NBK3 374 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 SLA2Q9H6Q3 261 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 CUL9Q8IWT3 2517 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 FAM25EA8MYX2 175 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 SYNGR3O43761 229 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 AKR1C4P17516 323 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 VAMP1P23763 118 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 BLVRBP30043 206 aaPredicted RBP12.72□□□□□ -0.37
SMG8-201ENST00000300917 BAMBIQ13145 260 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 RNFT1Q5M7Z0 435 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 ABLIM2Q6H8Q1 611 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 ZNF529Q6P280 563 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 SLC36A1Q7Z2H8 476 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 WNT5BQ9H1J7 359 aa12.72□□□□□ -0.37
SMG8-201ENST00000300917 NPDC1Q9NQX5 325 aaPredicted RBP12.72□□□□□ -0.37
SMG8-201ENST00000300917 FXYD6-FXYD2A0A087WZ82 144 aa12.71□□□□□ -0.37
SMG8-201ENST00000300917 SYNGR4O95473 234 aa12.71□□□□□ -0.37
SMG8-201ENST00000300917 IFNA6P05013 189 aa12.71□□□□□ -0.37
SMG8-201ENST00000300917 SP1P08047 785 aa12.71□□□□□ -0.37
SMG8-201ENST00000300917 MGMTP16455 207 aa12.71□□□□□ -0.37
SMG8-201ENST00000300917 RAB12Q6IQ22 244 aa12.71□□□□□ -0.37
SMG8-201ENST00000300917 TMEM229BQ8NBD8 167 aa12.71□□□□□ -0.37
SMG8-201ENST00000300917 SEMA6DQ8NFY4 1073 aa12.71□□□□□ -0.37
SMG8-201ENST00000300917 OR13C8Q8NGS7 320 aa12.71□□□□□ -0.37
SMG8-201ENST00000300917 PIGCQ92535 297 aa12.71□□□□□ -0.37
SMG8-201ENST00000300917 FXYD6Q9H0Q3 95 aa12.71□□□□□ -0.37
SMG8-201ENST00000300917 PRR13Q9NZ81 148 aa12.71□□□□□ -0.37
SMG8-201ENST00000300917 PIPOXQ9P0Z9 390 aa12.71□□□□□ -0.37
SMG8-201ENST00000300917 SCP2D1Q9UJQ7 156 aa12.71□□□□□ -0.37
SMG8-201ENST00000300917 ZNF587BE7ETH6 402 aa12.71□□□□□ -0.38
SMG8-201ENST00000300917 G3V3Q6 166 aa12.71□□□□□ -0.38
SMG8-201ENST00000300917 CYTIPO60759 359 aa12.71□□□□□ -0.38
SMG8-201ENST00000300917 ZNF92Q03936 586 aa12.71□□□□□ -0.38
SMG8-201ENST00000300917 SCRN3Q0VDG4 424 aa12.71□□□□□ -0.38
SMG8-201ENST00000300917 RAB35Q15286 201 aa12.71□□□□□ -0.38
SMG8-201ENST00000300917 ATPAF1Q5TC12 328 aaPredicted RBP12.71□□□□□ -0.38
SMG8-201ENST00000300917 RHOUQ7L0Q8 258 aa12.71□□□□□ -0.38
SMG8-201ENST00000300917 CDH24Q86UP0 819 aa12.71□□□□□ -0.38
SMG8-201ENST00000300917 FAM219AQ8IW50 185 aa12.71□□□□□ -0.38
SMG8-201ENST00000300917 BHLHE23Q8NDY6 225 aa12.71□□□□□ -0.38
SMG8-201ENST00000300917 CPEB3Q8NE35 698 aaKnown RBP12.71□□□□□ -0.38
SMG8-201ENST00000300917 LILRB4Q8NHJ6 448 aa12.71□□□□□ -0.38
SMG8-201ENST00000300917 KCNG3Q8TAE7 436 aa12.71□□□□□ -0.38
SMG8-201ENST00000300917 CPT1CQ8TCG5 803 aa12.71□□□□□ -0.38
SMG8-201ENST00000300917 ELMOD3Q96FG2 381 aa12.71□□□□□ -0.38
SMG8-201ENST00000300917 SEC22AQ96IW7 307 aa12.71□□□□□ -0.38
SMG8-201ENST00000300917 SPOCK3Q9BQ16 436 aa12.71□□□□□ -0.38
SMG8-201ENST00000300917 HDHD3Q9BSH5 251 aaPredicted RBP12.71□□□□□ -0.38
SMG8-201ENST00000300917 OR2H1Q9GZK4 316 aa12.71□□□□□ -0.38
SMG8-201ENST00000300917 SLCO5A1Q9H2Y9 848 aa12.71□□□□□ -0.38
SMG8-201ENST00000300917 ZNF701Q9NV72 531 aaPredicted RBP12.71□□□□□ -0.38
SMG8-201ENST00000300917 A0A1W2PR80 420 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 FAM221AA4D161 298 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 TPPPO94811 219 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 OR4E1P0C645 316 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 RAB6AP20340 208 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 ECH1Q13011 328 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 PDSS1Q5T2R2 415 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 C6orf201Q7Z4U5 140 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 DYRK2Q92630 601 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 INTS12Q96CB8 462 aaKnown RBP12.7□□□□□ -0.38
SMG8-201ENST00000300917 UPB1Q9UBR1 384 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 VSIG4Q9Y279 399 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 C3orf80F5H4A9 247 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 ARPC5O15511 151 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 SLC22A5O76082 557 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 ZNF735P0CB33 412 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 TAF9Q16594 264 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 MCEMP1Q8IX19 187 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 FER1L6-AS2Q96M78 137 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 NOP16Q9Y3C1 178 aaKnown RBP12.7□□□□□ -0.38
SMG8-201ENST00000300917 ZNF503-AS2A6NEH8 195 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 GALR2O43603 387 aaPredicted RBP12.7□□□□□ -0.38
SMG8-201ENST00000300917 CD37P11049 281 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 WT1P19544 449 aaPredicted RBP12.7□□□□□ -0.38
SMG8-201ENST00000300917 CCL1P22362 96 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 NPY4RP50391 375 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 CRIP3Q6Q6R5 217 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 NUFIP2Q7Z417 695 aaKnown RBP12.7□□□□□ -0.38
SMG8-201ENST00000300917 OR8H3Q8N146 312 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 OR2AK2Q8NG84 335 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 OR4K15Q8NH41 348 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 SCPEP1Q9HB40 452 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 TIMM10BQ9Y5J6 103 aa12.7□□□□□ -0.38
SMG8-201ENST00000300917 PIEZO2Q9H5I5 2752 aa12.69□□□□□ -0.38
SMG8-201ENST00000300917 OR2AT4A6NND4 320 aa12.69□□□□□ -0.38
SMG8-201ENST00000300917 MTRF1O75570 445 aaKnown RBP12.69□□□□□ -0.38
SMG8-201ENST00000300917 FARS2O95363 451 aaKnown RBP12.69□□□□□ -0.38
SMG8-201ENST00000300917 HLA-AP01891 365 aaKnown RBP12.69□□□□□ -0.38
SMG8-201ENST00000300917 CRYGSP22914 178 aa12.69□□□□□ -0.38
SMG8-201ENST00000300917 S100A1P23297 94 aa12.69□□□□□ -0.38
SMG8-201ENST00000300917 ATXN7L3Q14CW9 347 aaPredicted RBP12.69□□□□□ -0.38
SMG8-201ENST00000300917 JMJD6Q6NYC1 403 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms