RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 NEURL1O76050 574 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 TNFRSF4P43489 277 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 DUSP8Q13202 625 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 PTOV1Q86YD1 416 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 MS4A6EQ96DS6 147 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 S1PR3Q99500 378 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 GPR61Q9BZJ8 451 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 UQCC1Q9NVA1 299 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 MYH13Q9UKX3 1938 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 MMACHCQ9Y4U1 282 aa13.41□□□□□ -0.26
SCN3B-201ENST00000299333 PRSS37A4D1T9 235 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 GJA4P35212 333 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 HLA-DRB3P79483 266 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 PPP1R1AQ13522 171 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 RAB32Q13637 225 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 ZNF687Q8N1G0 1237 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 DUSP18Q8NEJ0 188 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 GMLQ99445 158 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 TIMM10BQ9Y5J6 103 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 MAP1LC3B2A6NCE7 125 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 SPRY1O43609 319 aaPredicted RBP13.4□□□□□ -0.26
SCN3B-201ENST00000299333 SPCS3P61009 180 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 DHRS2Q13268 280 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 GABRA6Q16445 453 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 HSD17B13Q7Z5P4 300 aaPredicted RBP13.4□□□□□ -0.26
SCN3B-201ENST00000299333 BVESQ8NE79 360 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 GPX7Q96SL4 187 aaPredicted RBP13.4□□□□□ -0.26
SCN3B-201ENST00000299333 MAP1LC3BQ9GZQ8 125 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 HES4Q9HCC6 221 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 IL23AQ9NPF7 189 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 GPANK1O95872 356 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 GLRA1P23415 457 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 ZBTB25P24278 435 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 INSL4Q14641 139 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 MRM1Q6IN84 353 aaKnown RBP13.4□□□□□ -0.26
SCN3B-201ENST00000299333 OR52N5Q8NH56 324 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 MS4A7Q9GZW8 240 aaPredicted RBP13.4□□□□□ -0.26
SCN3B-201ENST00000299333 LTBP3Q9NS15 1303 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 ATF1P18846 271 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 HTR1DP28221 377 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 CD96P40200 585 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 GNG4P50150 75 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 FGF8P55075 233 aaPredicted RBP13.4□□□□□ -0.26
SCN3B-201ENST00000299333 AGERQ15109 404 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 OR5C1Q8NGR4 320 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 MED29Q9NX70 200 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 HS3ST2Q9Y278 367 aa13.4□□□□□ -0.26
SCN3B-201ENST00000299333 FPR2P25090 351 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 ERVFRD-1P60508 538 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 SLC25A26Q70HW3 274 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 TMEM230Q96A57 120 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 MRPS24Q96EL2 167 aaKnown RBP13.39□□□□□ -0.27
SCN3B-201ENST00000299333 DUSP23Q9BVJ7 150 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 C5orf49A4QMS7 147 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 CRHP06850 196 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 AESQ08117 197 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 ELOBQ15370 118 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 BCL2L2Q92843 193 aaPredicted RBP13.39□□□□□ -0.27
SCN3B-201ENST00000299333 PECRQ9BY49 303 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 WDR61Q9GZS3 305 aaKnown RBP13.39□□□□□ -0.27
SCN3B-201ENST00000299333 A0A1W2PNR3 127 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 SLC6A1P30531 599 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 HIST3H3Q16695 136 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 DEFB108BQ8NET1 73 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 EDAQ92838 391 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 NPAS1Q99742 590 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 KIAA1456Q9P272 454 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 LSM2Q9Y333 95 aaKnown RBP13.39□□□□□ -0.27
SCN3B-201ENST00000299333 MPC2O95563 127 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 WNT11O96014 354 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 CAMPP49913 170 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 OR4A4PQ8NGN8 299 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 NXPE3Q969Y0 559 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 ATP5SQ99766 215 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 LYRM4Q9HD34 91 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 PITPNC1Q9UKF7 332 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 NCBP2LA6PVI3 153 aaKnown RBP13.39□□□□□ -0.27
SCN3B-201ENST00000299333 TMPRSS11DO60235 418 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 FAM87AP0C7U9 286 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 PNLIPRP3Q17RR3 467 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 ADAMTSL4Q6UY14 1074 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 KMT5CQ86Y97 462 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 OSR2Q8N2R0 312 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 ARRDC1Q8N5I2 433 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 SPICQ8N5J4 248 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 ST6GAL2Q96JF0 529 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 S1PR5Q9H228 398 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 LPAR3Q9UBY5 353 aa13.39□□□□□ -0.27
SCN3B-201ENST00000299333 SLC17A2O00624 439 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 NRG2O14511 850 aaPredicted RBP13.38□□□□□ -0.27
SCN3B-201ENST00000299333 S100A4P26447 101 aaKnown RBP13.38□□□□□ -0.27
SCN3B-201ENST00000299333 SULT1A1P50225 295 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 PRDX4Q13162 271 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 OR10AD1Q8NGE0 317 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 OR4C12Q96R67 309 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 RSG1Q9BU20 258 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 LAMB4A4D0S4 1761 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 HSPB2A8KAH6 182 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 TNFRSF10CO14798 259 aa13.38□□□□□ -0.27
SCN3B-201ENST00000299333 CRISP2P16562 243 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms