RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 MGMTP16455 207 aa13.86□□□□□ -0.19
NCKIPSD-201ENST00000294129 PTGFRP43088 359 aa13.86□□□□□ -0.19
NCKIPSD-201ENST00000294129 ZNF84P51523 738 aa13.86□□□□□ -0.19
NCKIPSD-201ENST00000294129 ZNF774Q6NX45 483 aa13.86□□□□□ -0.19
NCKIPSD-201ENST00000294129 NAXDQ8IW45 347 aa13.86□□□□□ -0.19
NCKIPSD-201ENST00000294129 PHB2Q99623 299 aa13.86□□□□□ -0.19
NCKIPSD-201ENST00000294129 URM1Q9BTM9 101 aaKnown RBP13.86□□□□□ -0.19
NCKIPSD-201ENST00000294129 PADI1Q9ULC6 663 aa13.86□□□□□ -0.19
NCKIPSD-201ENST00000294129 CHRM2P08172 466 aa13.86□□□□□ -0.19
NCKIPSD-201ENST00000294129 NUP62P37198 522 aaPredicted RBP13.86□□□□□ -0.19
NCKIPSD-201ENST00000294129 CARD18P57730 90 aa13.86□□□□□ -0.19
NCKIPSD-201ENST00000294129 LSM6P62312 80 aaKnown RBP13.86□□□□□ -0.19
NCKIPSD-201ENST00000294129 RAC1P63000 192 aa13.86□□□□□ -0.19
NCKIPSD-201ENST00000294129 KCNMB1Q16558 191 aa13.86□□□□□ -0.19
NCKIPSD-201ENST00000294129 ZNF660Q6AZW8 331 aaPredicted RBP13.86□□□□□ -0.19
NCKIPSD-201ENST00000294129 PPP1R32Q7Z5V6 425 aa13.86□□□□□ -0.19
NCKIPSD-201ENST00000294129 NECAB3Q96P71 396 aaPredicted RBP13.86□□□□□ -0.19
NCKIPSD-201ENST00000294129 FAM230AA0A1W2PPH8 454 aa13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 HOXA6P31267 233 aa13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 DCAF12Q5T6F0 453 aa13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 BATF2Q8N1L9 274 aa13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 BOLLQ8N9W6 283 aaKnown RBP13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 SCARB1Q8WTV0 552 aa13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 TMEM54Q969K7 222 aa13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 FBXW5Q969U6 566 aa13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 ZNF75AQ96N20 296 aa13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 TCFL5Q9UL49 500 aa13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 LOXL2Q9Y4K0 774 aa13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 MED13Q9UHV7 2174 aa13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 MFSD2BA6NFX1 497 aa13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 DHRS3O75911 302 aa13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 NR2C1P13056 603 aa13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 FKBP2P26885 142 aaKnown RBP13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 OR3A2P47893 321 aa13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 SRYQ05066 204 aa13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 TRA2AQ13595 282 aaKnown RBP eCLIP13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 TIPARPQ7Z3E1 657 aaKnown RBP13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 DTWD2Q8NBA8 298 aa13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 CSNK2A3Q8NEV1 391 aa13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 OR56B1Q8NGI3 324 aa13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 OR5H2Q8NGV7 314 aa13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 VRK1Q99986 396 aaPredicted RBP13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 ZNF471Q9BX82 626 aaPredicted RBP13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 WDR13Q9H1Z4 485 aa13.85□□□□□ -0.19
NCKIPSD-201ENST00000294129 LOC102725191A0A1B0GVB3 256 aa13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 EFSO43281 561 aa13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 TSPAN9O75954 239 aa13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 VAMP5O95183 116 aa13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 TMEM225BP0DP42 221 aa13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 GDF1P27539 372 aa13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 DLSTP36957 453 aa13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 RGS19P49795 217 aa13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 LUMP51884 338 aaPredicted RBP13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 SUCLG1P53597 346 aaKnown RBP13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 ECH1Q13011 328 aa13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 C9orf135Q5VTT2 229 aa13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 RGS7BPQ6MZT1 257 aaPredicted RBP13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 ZNF845Q96IR2 970 aaPredicted RBP13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 HDHD3Q9BSH5 251 aaPredicted RBP13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 SLC2A8Q9NY64 477 aa13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 SGCEO43556 437 aa13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 SPRY1O43609 319 aaPredicted RBP13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 SCGNO76038 276 aa13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 LCATP04180 440 aa13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 ZP3P21754 424 aa13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 SPINK14Q6IE38 97 aa13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 C6orf201Q7Z4U5 140 aa13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 LHFPL5Q8TAF8 219 aa13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 CT55Q8WUE5 264 aa13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 ZNF107Q9UII5 783 aaPredicted RBP13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 KIAA1549Q9HCM3 1950 aa13.84□□□□□ -0.19
NCKIPSD-201ENST00000294129 OR6C65A6NJZ3 312 aa13.83□□□□□ -0.19
NCKIPSD-201ENST00000294129 ZNF205O95201 554 aa13.83□□□□□ -0.19
NCKIPSD-201ENST00000294129 RPA2P15927 270 aa13.83□□□□□ -0.19
NCKIPSD-201ENST00000294129 NAT1P18440 290 aa13.83□□□□□ -0.19
NCKIPSD-201ENST00000294129 CCL1P22362 96 aa13.83□□□□□ -0.19
NCKIPSD-201ENST00000294129 SNU13P55769 128 aaKnown RBP13.83□□□□□ -0.19
NCKIPSD-201ENST00000294129 ZNF239Q16600 458 aaKnown RBP13.83□□□□□ -0.19
NCKIPSD-201ENST00000294129 C10orf128Q5T292 105 aa13.83□□□□□ -0.19
NCKIPSD-201ENST00000294129 C11orf87Q6NUJ2 197 aa13.83□□□□□ -0.19
NCKIPSD-201ENST00000294129 OR2W3Q7Z3T1 314 aa13.83□□□□□ -0.19
NCKIPSD-201ENST00000294129 ABHD3Q8WU67 409 aa13.83□□□□□ -0.19
NCKIPSD-201ENST00000294129 SPTSSAQ969W0 71 aa13.83□□□□□ -0.19
NCKIPSD-201ENST00000294129 DEPPQ9NTK1 212 aa13.83□□□□□ -0.19
NCKIPSD-201ENST00000294129 EHFQ9NZC4 300 aa13.83□□□□□ -0.19
NCKIPSD-201ENST00000294129 ZNF581Q9P0T4 197 aa13.83□□□□□ -0.19
NCKIPSD-201ENST00000294129 PINLYPA6NC86 204 aa13.83□□□□□ -0.2
NCKIPSD-201ENST00000294129 GSTP1P09211 210 aaKnown RBP13.83□□□□□ -0.2
NCKIPSD-201ENST00000294129 ACKR3P25106 362 aa13.83□□□□□ -0.2
NCKIPSD-201ENST00000294129 SERPINF1P36955 418 aa13.83□□□□□ -0.2
NCKIPSD-201ENST00000294129 MTCP1P56278 107 aa13.83□□□□□ -0.2
NCKIPSD-201ENST00000294129 ACER2Q5QJU3 275 aa13.83□□□□□ -0.2
NCKIPSD-201ENST00000294129 BRICD5Q6PL45 260 aa13.83□□□□□ -0.2
NCKIPSD-201ENST00000294129 AAED1Q7RTV5 226 aa13.83□□□□□ -0.2
NCKIPSD-201ENST00000294129 STPG2Q8N412 459 aa13.83□□□□□ -0.2
NCKIPSD-201ENST00000294129 ZDHHC22Q8N966 263 aa13.83□□□□□ -0.2
NCKIPSD-201ENST00000294129 TERB2Q8NHR7 220 aa13.83□□□□□ -0.2
NCKIPSD-201ENST00000294129 MITD1Q8WV92 249 aa13.83□□□□□ -0.2
NCKIPSD-201ENST00000294129 SH2D2AQ9NP31 389 aa13.83□□□□□ -0.2
NCKIPSD-201ENST00000294129 MBD2Q9UBB5 411 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms