RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 NUDT16L1Q9BRJ7 211 aaKnown RBP8.15□□□□□ -1.1
CCDC58-201ENST00000291458 YIPF3Q9GZM5 350 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 GABARAPL1Q9H0R8 117 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 SNTG1Q9NSN8 517 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 DUX4Q9UBX2 424 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 ZNF69Q9UC07 566 aa8.15□□□□□ -1.1
CCDC58-201ENST00000291458 SOX21Q9Y651 276 aaPredicted RBP8.15□□□□□ -1.1
CCDC58-201ENST00000291458 MDFIC2A0A1B0GVS7 189 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 TMEM269A0A1B0GVZ9 245 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 ZNF670-ZNF695F2Z2N8 137 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 CDIPTO14735 213 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 RPP14O95059 124 aaKnown RBP8.14□□□□□ -1.11
CCDC58-201ENST00000291458 IGHV4-38-2P0DP08 117 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 FAHP16930 419 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 ALOX5APP20292 161 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 CFL1P23528 166 aaKnown RBP8.14□□□□□ -1.11
CCDC58-201ENST00000291458 THBS2P35442 1172 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 GPM6AP51674 278 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 RIDAP52758 137 aaKnown RBP8.14□□□□□ -1.11
CCDC58-201ENST00000291458 FGF12P61328 243 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 MZT1Q08AG7 82 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 IKZF1Q13422 519 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 ZNF829Q3KNS6 432 aaPredicted RBP8.14□□□□□ -1.11
CCDC58-201ENST00000291458 ZIK1Q3SY52 487 aaPredicted RBP8.14□□□□□ -1.11
CCDC58-201ENST00000291458 WDR25Q64LD2 544 aaPredicted RBP8.14□□□□□ -1.11
CCDC58-201ENST00000291458 RUSC1-AS1Q66K80 236 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 C12orf73Q69YU5 71 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 KCTD18Q6PI47 426 aaPredicted RBP8.14□□□□□ -1.11
CCDC58-201ENST00000291458 ZNF322Q6U7Q0 402 aaPredicted RBP8.14□□□□□ -1.11
CCDC58-201ENST00000291458 FAM90A1Q86YD7 464 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 ZDHHC23Q8IYP9 409 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 GCSAMQ8N6F7 178 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 FAM216BQ8N7L0 139 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 SPERTQ8NA61 448 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 CSNK2A3Q8NEV1 391 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 OR10H4Q8NGA5 316 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 OR5T2Q8NGG2 359 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 OR51E1Q8TCB6 317 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 ERGIC1Q969X5 290 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 OR8B4Q96RC9 309 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 TEAD3Q99594 435 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 CCL13Q99616 98 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 PKP2Q99959 881 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 MICU1Q9BPX6 476 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 PCGF1Q9BSM1 259 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 RTL8AQ9BWD3 113 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 SUCNR1Q9BXA5 334 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 MROQ9BYG7 248 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 FGF23Q9GZV9 251 aaPredicted RBP8.14□□□□□ -1.11
CCDC58-201ENST00000291458 PBOV1Q9GZY1 135 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 ESM1Q9NQ30 184 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 ERVK-18Q9QC07 812 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 DNAJB11Q9UBS4 358 aa8.14□□□□□ -1.11
CCDC58-201ENST00000291458 TRAV38-1A0A0B4J264 116 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 A6NIN4 97 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 LOC110117498-PIK3R3F6TDL0 507 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 EI24O14681 340 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 PHYHO14832 338 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 TMPRSS2O15393 492 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 AKR7A2O43488 359 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 SFTPBP07988 381 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 SELLP14151 372 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 DDOSTP39656 456 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 HILS1P60008 231 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 PRB3Q04118 309 aaPredicted RBP8.13□□□□□ -1.11
CCDC58-201ENST00000291458 KLF17Q5JT82 389 aaPredicted RBP8.13□□□□□ -1.11
CCDC58-201ENST00000291458 BCL2L15Q5TBC7 163 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 PLCXD3Q63HM9 321 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 WDR82Q6UXN9 313 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 BRD3OSQ6XYD6 125 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 MOB3CQ70IA8 216 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 ASRGL1Q7L266 308 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 MEPCEQ7L2J0 689 aaKnown RBP8.13□□□□□ -1.11
CCDC58-201ENST00000291458 SSX6Q7RTT6 188 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 THAP5Q7Z6K1 395 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 GID4Q8IVV7 300 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 PDZD9Q8IXQ8 264 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 FTMTQ8N4E7 242 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 YIPF7Q8N8F6 280 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 HPSE2Q8WWQ2 592 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 RAB40AQ8WXH6 277 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 CENPNQ96H22 339 aaPredicted RBP8.13□□□□□ -1.11
CCDC58-201ENST00000291458 RNF170Q96K19 258 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 MS4A7Q9GZW8 240 aaPredicted RBP8.13□□□□□ -1.11
CCDC58-201ENST00000291458 WDR13Q9H1Z4 485 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 RGCCQ9H4X1 137 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 ADGRL4Q9HBW9 690 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 GPR84Q9NQS5 396 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 TNFRSF19Q9NS68 423 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 FAM206AQ9NX38 181 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 NUP50Q9UKX7 468 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 PIGLQ9Y2B2 252 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 ORC6Q9Y5N6 252 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 COL6A5A8TX70 2615 aa8.13□□□□□ -1.11
CCDC58-201ENST00000291458 PPIAL4CA0A0B4J2A2 164 aa8.12□□□□□ -1.11
CCDC58-201ENST00000291458 ZNF816-ZNF321PA0A0X1KG74 233 aa8.12□□□□□ -1.11
CCDC58-201ENST00000291458 DNAJC9-AS1A6NH13 148 aa8.12□□□□□ -1.11
CCDC58-201ENST00000291458 SLC22A31A6NKX4 558 aa8.12□□□□□ -1.11
CCDC58-201ENST00000291458 TRIM77I1YAP6 450 aa8.12□□□□□ -1.11
CCDC58-201ENST00000291458 P2RY10O00398 339 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms