RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 XRCC2O43543 280 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 SSNA1O43805 119 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 WISP2O76076 250 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 CD79AP11912 226 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 CXCL3P19876 107 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 ANXA7P20073 488 aaKnown RBP8.33□□□□□ -1.08
TRIM55-201ENST00000276573 PRKACBP22694 351 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 AGTR1P30556 359 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 ARR3P36575 388 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 RPS27AP62979 156 aaKnown RBP8.33□□□□□ -1.08
TRIM55-201ENST00000276573 PLAC9Q5JTB6 97 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 CLVS2Q5SYC1 327 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 TMEM42Q69YG0 159 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 ZNF584Q8IVC4 421 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 OR56B1Q8NGI3 324 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 OR5D18Q8NGL1 313 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 SPSB1Q96BD6 273 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 SEC22CQ9BRL7 303 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 TINAGL1Q9GZM7 467 aaPredicted RBP8.33□□□□□ -1.08
TRIM55-201ENST00000276573 CST11Q9H112 138 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 C12orf49Q9H741 205 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 RTTNQ86VV8 2226 aa8.33□□□□□ -1.08
TRIM55-201ENST00000276573 ZNF407Q9C0G0 2248 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 MEIKINA0A087WXM9 373 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 ZNF503-AS2A6NEH8 195 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 SNRPGP15A8MWD9 76 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 SMLR1H3BR10 107 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 FABP7O15540 132 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 SSX5O60225 188 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 NRASP01111 189 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 EDN3P14138 238 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 MPGP29372 298 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 MTCP1P56278 107 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 PRSS12P56730 875 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 RAB1AP62820 205 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 CDK10Q15131 360 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 CNN3Q15417 329 aaKnown RBP8.32□□□□□ -1.08
TRIM55-201ENST00000276573 OR8B8Q15620 311 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 FBXW9Q5XUX1 488 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 TMEM53Q6P2H8 277 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 RTN4RL2Q86UN3 420 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 GVQW1Q8N7I0 195 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 OR51T1Q8NGJ9 327 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 OR10K1Q8NGX5 313 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 NUDCD2Q8WVJ2 157 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 BCL2L2Q92843 193 aaPredicted RBP8.32□□□□□ -1.08
TRIM55-201ENST00000276573 RAB3CQ96E17 227 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 S100A13Q99584 98 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 GPN1Q9HCN4 374 aaPredicted RBP8.32□□□□□ -1.08
TRIM55-201ENST00000276573 KCNK7Q9Y2U2 307 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 BOLA1Q9Y3E2 137 aa8.32□□□□□ -1.08
TRIM55-201ENST00000276573 FOXI3A8MTJ6 420 aaPredicted RBP8.31□□□□□ -1.08
TRIM55-201ENST00000276573 AMY2AP04746 511 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 TMEM225BP0DP42 221 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 VSIG10L2P0DP72 767 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 ANXA3P12429 323 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 HIST1H1DP16402 221 aaKnown RBP8.31□□□□□ -1.08
TRIM55-201ENST00000276573 MGMTP16455 207 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 OR3A2P47893 321 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 GNG2P59768 71 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 ZP1P60852 638 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 PNLIPRP3Q17RR3 467 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 ZBTB37Q5TC79 503 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 SEZ6L2Q6UXD5 910 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 P4HA3Q7Z4N8 544 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 BPIFB2Q8N4F0 458 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 STEAP2Q8NFT2 490 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 OR4S1Q8NGB4 309 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 OR1K1Q8NGR3 316 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 GMPPAQ96IJ6 420 aaPredicted RBP8.31□□□□□ -1.08
TRIM55-201ENST00000276573 SLC6A7Q99884 636 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 SLC25A21Q9BQT8 299 aaPredicted RBP8.31□□□□□ -1.08
TRIM55-201ENST00000276573 TM2D1Q9BX74 207 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 GLRX2Q9NS18 164 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 CLCF1Q9UBD9 225 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 DNAJC13O75165 2243 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 IGKV1-27A0A075B6S5 117 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 FAM230AA0A1W2PPH8 454 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 FAM172BPA6NC97 362 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 OR14I1A6ND48 311 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 DISC1C4P0D8 188 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 PROB1E7EW31 1015 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 AQP7O14520 342 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 SS18L1O75177 396 aaPredicted RBP8.31□□□□□ -1.08
TRIM55-201ENST00000276573 IL18BPO95998 194 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 RLN1P04808 185 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 SERPINA2P20848 420 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 RBP2P50120 134 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 FUT6P51993 359 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 PLP2Q04941 152 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 MEF2DQ14814 521 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 SF3B4Q15427 424 aaKnown RBP eCLIP8.31□□□□□ -1.08
TRIM55-201ENST00000276573 ZNF626Q68DY1 528 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 ASCL4Q6XD76 172 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 IDO2Q6ZQW0 420 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 LHFPL2Q6ZUX7 228 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 MOB3CQ70IA8 216 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 ASCL5Q7RTU5 278 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 DPPA2Q7Z7J5 298 aa8.31□□□□□ -1.08
TRIM55-201ENST00000276573 SPICQ8N5J4 248 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms