RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 MOB3AQ96BX8 217 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 MS4A10Q96PG2 267 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 YPEL2Q96QA6 119 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 MAGT1Q9H0U3 335 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 ZNF552Q9H707 407 aaPredicted RBP8.19□□□□□ -1.1
PDGFC-201ENST00000274071 CLEC5AQ9NY25 188 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 WSB1Q9Y6I7 421 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 MYO16Q9Y6X6 1858 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 NUMA1Q14980 2115 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 IGHV2OR16-5A0A0B4J2B6 119 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 A0A1B0GU03 582 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 PRR32B1ATL7 298 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 CD55P08174 381 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 ARR3P36575 388 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 RANP62826 216 aaKnown RBP8.18□□□□□ -1.1
PDGFC-201ENST00000274071 B4GALNT1Q00973 533 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 LASP1Q14847 261 aaKnown RBP8.18□□□□□ -1.1
PDGFC-201ENST00000274071 ANKRD55Q3KP44 614 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 RNF219Q5W0B1 726 aaPredicted RBP8.18□□□□□ -1.1
PDGFC-201ENST00000274071 UNQ5815/PRO19632Q6UWF5 114 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 MYPOPQ86VE0 399 aaPredicted RBP8.18□□□□□ -1.1
PDGFC-201ENST00000274071 C7orf61Q8IZ16 206 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 C17orf78Q8N4C9 275 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 TMEM156Q8N614 296 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 GVQW1Q8N7I0 195 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 OR5L1Q8NGL2 311 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 PFN4Q8NHR9 129 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 SNIP1Q8TAD8 396 aaKnown RBP8.18□□□□□ -1.1
PDGFC-201ENST00000274071 ZNRF4Q8WWF5 429 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 SMIM12Q96EX1 92 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 SLC35G5Q96KT7 338 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 PRAP1Q96NZ9 151 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 MS4A8Q9BY19 250 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 DMRT3Q9NQL9 472 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 CXXC1Q9P0U4 656 aaPredicted RBP8.18□□□□□ -1.1
PDGFC-201ENST00000274071 HCSTQ9UBK5 93 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 PLXNB3Q9ULL4 1909 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 DOCK6Q96HP0 2047 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 MMP23AO75900 390 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 KNG1P01042 644 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 TMEM225BP0DP42 221 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 LAMP2P13473 410 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 PRKAG1P54619 331 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 MRPL58Q14197 206 aaKnown RBP8.18□□□□□ -1.1
PDGFC-201ENST00000274071 TAF9Q16594 264 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 CCSMST1Q4G0I0 132 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 FBXW12Q6X9E4 464 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 SLCO4C1Q6ZQN7 724 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 ZNF550Q7Z398 422 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 HS6ST3Q8IZP7 471 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 OR2AJ1Q8NGZ0 328 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 ZNF296Q8WUU4 475 aaPredicted RBP8.18□□□□□ -1.1
PDGFC-201ENST00000274071 LOXL4Q96JB6 756 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 ZDHHC6Q9H6R6 413 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 WFDC1Q9HC57 220 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 ZNF701Q9NV72 531 aaPredicted RBP8.18□□□□□ -1.1
PDGFC-201ENST00000274071 MRPS18BQ9Y676 258 aaKnown RBP8.18□□□□□ -1.1
PDGFC-201ENST00000274071 KCNE3Q9Y6H6 103 aa8.18□□□□□ -1.1
PDGFC-201ENST00000274071 TRBV5-5A0A0J9YX44 114 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 AQP7P3A6NL99 342 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 RCBTB2O95199 551 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 CLDN7O95471 211 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 MMP9P14780 707 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 HRH1P35367 487 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 RIPPLY3P57055 190 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 EFEMP1Q12805 493 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 ICAM4Q14773 271 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 TMEM183BQ1AE95 376 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 TPTE2P1Q5T6R2 138 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 WDR25Q64LD2 544 aaPredicted RBP8.17□□□□□ -1.1
PDGFC-201ENST00000274071 VWA1Q6PCB0 445 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 SPSB3Q6PJ21 355 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 WFDC8Q8IUA0 241 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 NPEPL1Q8NDH3 523 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 OR51A4Q8NGJ6 313 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 OR4D5Q8NGN0 318 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 OR10AC1Q8NH08 325 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 OR2L2Q8NH16 312 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 OR51A7Q8NH64 312 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 TMEM170AQ8WVE7 144 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 SLC41A2Q96JW4 573 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 SLC2A9Q9NRM0 540 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.17□□□□□ -1.1
PDGFC-201ENST00000274071 FRRS1LQ9P0K9 344 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 TRAV27A0A087WT01 109 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 A0A1B0GTH9 108 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 CDC14CA4D256 554 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 K7N7A8 449 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 CYR61O00622 381 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 SLC16A5O15375 505 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 SERPINA4P29622 427 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 SLC11A1P49279 550 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 ZNF41P51814 821 aaPredicted RBP8.17□□□□□ -1.1
PDGFC-201ENST00000274071 IL24Q13007 206 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 RAB11BQ15907 218 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 OR56A1Q8NGH5 318 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 OR10S1Q8NGN2 331 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 LIPHQ8WWY8 451 aa8.17□□□□□ -1.1
PDGFC-201ENST00000274071 BCL2L2Q92843 193 aaPredicted RBP8.17□□□□□ -1.1
PDGFC-201ENST00000274071 TMEM230Q96A57 120 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms