RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 COMMD2Q86X83 199 aa21.23■□□□□ 0.99
SSBP4-201ENST00000270061 OR51A2Q8NGJ7 313 aa21.23■□□□□ 0.99
SSBP4-201ENST00000270061 RAB40AQ8WXH6 277 aa21.23■□□□□ 0.99
SSBP4-201ENST00000270061 LYZL4Q96KX0 146 aa21.23■□□□□ 0.99
SSBP4-201ENST00000270061 UBTD1Q9HAC8 227 aa21.23■□□□□ 0.99
SSBP4-201ENST00000270061 V9GYS6 101 aa21.23■□□□□ 0.99
SSBP4-201ENST00000270061 ITGA5P08648 1049 aa21.22■□□□□ 0.99
SSBP4-201ENST00000270061 ZNF20P17024 532 aa21.22■□□□□ 0.99
SSBP4-201ENST00000270061 TRIM16LQ309B1 348 aa21.22■□□□□ 0.99
SSBP4-201ENST00000270061 DEFB113Q30KQ7 82 aa21.22■□□□□ 0.99
SSBP4-201ENST00000270061 C9orf135Q5VTT2 229 aa21.22■□□□□ 0.99
SSBP4-201ENST00000270061 ANKRD16Q6P6B7 361 aa21.22■□□□□ 0.99
SSBP4-201ENST00000270061 Q8N402 240 aa21.22■□□□□ 0.99
SSBP4-201ENST00000270061 OR1M1Q8NGA1 313 aa21.22■□□□□ 0.99
SSBP4-201ENST00000270061 C10orf35Q96D05 121 aa21.22■□□□□ 0.99
SSBP4-201ENST00000270061 FAM71F1Q96KD3 344 aaPredicted RBP21.22■□□□□ 0.99
SSBP4-201ENST00000270061 COX4I2Q96KJ9 171 aa21.22■□□□□ 0.99
SSBP4-201ENST00000270061 SOX7Q9BT81 388 aa21.22■□□□□ 0.99
SSBP4-201ENST00000270061 RNF121Q9H920 327 aa21.22■□□□□ 0.99
SSBP4-201ENST00000270061 TMEM138Q9NPI0 162 aa21.22■□□□□ 0.99
SSBP4-201ENST00000270061 HEATR1Q9H583 2144 aaKnown RBP21.22■□□□□ 0.99
SSBP4-201ENST00000270061 C5orf63A6NC05 138 aa21.21■□□□□ 0.99
SSBP4-201ENST00000270061 HLA-DQB1P01920 261 aa21.21■□□□□ 0.99
SSBP4-201ENST00000270061 BDKRB2P30411 391 aa21.21■□□□□ 0.99
SSBP4-201ENST00000270061 ARR3P36575 388 aa21.21■□□□□ 0.99
SSBP4-201ENST00000270061 GNALP38405 381 aa21.21■□□□□ 0.99
SSBP4-201ENST00000270061 SCN1BQ07699 218 aa21.21■□□□□ 0.99
SSBP4-201ENST00000270061 RAB11BQ15907 218 aa21.21■□□□□ 0.99
SSBP4-201ENST00000270061 C1orf100Q5SVJ3 147 aa21.21■□□□□ 0.99
SSBP4-201ENST00000270061 CMTM4Q8IZR5 234 aa21.21■□□□□ 0.99
SSBP4-201ENST00000270061 POC5Q8NA72 575 aa21.21■□□□□ 0.99
SSBP4-201ENST00000270061 OR1K1Q8NGR3 316 aa21.21■□□□□ 0.99
SSBP4-201ENST00000270061 SLC25A38Q96DW6 304 aa21.21■□□□□ 0.99
SSBP4-201ENST00000270061 ZNF391Q9UJN7 358 aa21.21■□□□□ 0.99
SSBP4-201ENST00000270061 A0A096LPE4 126 aa21.2■□□□□ 0.99
SSBP4-201ENST00000270061 A0A0G2JMP0 313 aa21.2■□□□□ 0.99
SSBP4-201ENST00000270061 A0A0X1KG70 313 aa21.2■□□□□ 0.99
SSBP4-201ENST00000270061 A0A1W2PPZ6 126 aa21.2■□□□□ 0.99
SSBP4-201ENST00000270061 DHRS3O75911 302 aa21.2■□□□□ 0.99
SSBP4-201ENST00000270061 RAB3AP20336 220 aa21.2■□□□□ 0.99
SSBP4-201ENST00000270061 HGFACQ04756 655 aa21.2■□□□□ 0.99
SSBP4-201ENST00000270061 OR4M2Q8NGB6 313 aa21.2■□□□□ 0.99
SSBP4-201ENST00000270061 OR6M1Q8NGM8 313 aa21.2■□□□□ 0.99
SSBP4-201ENST00000270061 BCL2L2Q92843 193 aaPredicted RBP21.2■□□□□ 0.99
SSBP4-201ENST00000270061 SLC25A28Q96A46 364 aa21.2■□□□□ 0.99
SSBP4-201ENST00000270061 SGK3Q96BR1 496 aa21.2■□□□□ 0.99
SSBP4-201ENST00000270061 MUCL1Q96DR8 90 aa21.2■□□□□ 0.99
SSBP4-201ENST00000270061 CIB4A0PJX0 185 aa21.2■□□□□ 0.98
SSBP4-201ENST00000270061 MTRF1O75570 445 aaKnown RBP21.2■□□□□ 0.98
SSBP4-201ENST00000270061 UBL3O95164 117 aa21.2■□□□□ 0.98
SSBP4-201ENST00000270061 PTTG1O95997 202 aa21.2■□□□□ 0.98
SSBP4-201ENST00000270061 SPOCK1Q08629 439 aa21.2■□□□□ 0.98
SSBP4-201ENST00000270061 SNAI3Q3KNW1 292 aa21.2■□□□□ 0.98
SSBP4-201ENST00000270061 TIMM23BQ5SRD1 257 aa21.2■□□□□ 0.98
SSBP4-201ENST00000270061 CDH26Q8IXH8 852 aa21.2■□□□□ 0.98
SSBP4-201ENST00000270061 CPEB3Q8NE35 698 aaKnown RBP21.2■□□□□ 0.98
SSBP4-201ENST00000270061 ESRP2Q9H6T0 727 aaKnown RBP21.2■□□□□ 0.98
SSBP4-201ENST00000270061 FLNAP21333 2647 aaKnown RBP21.2■□□□□ 0.98
SSBP4-201ENST00000270061 ACANP16112 2415 aa21.19■□□□□ 0.98
SSBP4-201ENST00000270061 A0A1W2PQ09 198 aa21.19■□□□□ 0.98
SSBP4-201ENST00000270061 DHRS7CA6NNS2 312 aa21.19■□□□□ 0.98
SSBP4-201ENST00000270061 RAD51DO75771 328 aa21.19■□□□□ 0.98
SSBP4-201ENST00000270061 ERCC1P07992 297 aaPredicted RBP21.19■□□□□ 0.98
SSBP4-201ENST00000270061 OCMP0CE72 109 aaPredicted RBP21.19■□□□□ 0.98
SSBP4-201ENST00000270061 PITPNAQ00169 270 aa21.19■□□□□ 0.98
SSBP4-201ENST00000270061 PPA1Q15181 289 aa21.19■□□□□ 0.98
SSBP4-201ENST00000270061 TMEM53Q6P2H8 277 aa21.19■□□□□ 0.98
SSBP4-201ENST00000270061 SSX8Q7RTT4 187 aa21.19■□□□□ 0.98
SSBP4-201ENST00000270061 RGCCQ9H4X1 137 aa21.19■□□□□ 0.98
SSBP4-201ENST00000270061 TBC1D24Q9ULP9 559 aa21.19■□□□□ 0.98
SSBP4-201ENST00000270061 RHBDD3Q9Y3P4 386 aa21.19■□□□□ 0.98
SSBP4-201ENST00000270061 PLCE1Q9P212 2302 aa21.19■□□□□ 0.98
SSBP4-201ENST00000270061 TPPPO94811 219 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 HLA-HP01893 362 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 HTR2CP28335 458 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 THBS4P35443 961 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 CAPZA1P52907 286 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 GFOD2Q3B7J2 385 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 C20orf204Q6ZNR8 217 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 SYNPRQ8TBG9 265 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 FAM3DQ96BQ1 224 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 HAVCR1Q96D42 359 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 S100A16Q96FQ6 103 aaKnown RBP21.18■□□□□ 0.98
SSBP4-201ENST00000270061 UQCC2Q9BRT2 126 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 C1QTNF5Q9BXJ0 243 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 BEX4Q9NWD9 120 aaPredicted RBP21.18■□□□□ 0.98
SSBP4-201ENST00000270061 LOC100289279A0A1B0GTE1 492 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 OR5H1A6NKK0 313 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 SULT1B1O43704 296 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 ALX3O95076 343 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 PLAUP00749 431 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 LCATP04180 440 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 MADCAM1Q13477 382 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 C2orf76Q3KRA6 126 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 GLYATL3Q5SZD4 288 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 COLCA1Q6ZS62 124 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 OR51D1Q8NGF3 324 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 PIGTQ969N2 578 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 SORCS2Q96PQ0 1159 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 ABHD1Q96SE0 405 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms