RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 S100PBPQ96BU1 408 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 ABHD1Q96SE0 405 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 POFUT1Q9H488 388 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 GPR173Q9NS66 373 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 KCNN3Q9UGI6 736 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 NBEAQ8NFP9 2946 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 TRGV8A0A0C4DH27 118 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 CTDSPLO15194 276 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 CST4P01036 141 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 CECR9P0C854 216 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 TUBG1P23258 451 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 EFNB2P52799 333 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 PRSS12P56730 875 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 QRFPP83859 136 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 HLXQ14774 488 aaPredicted RBP12.16□□□□□ -0.46
SS18-201ENST00000269137 FBXW12Q6X9E4 464 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 RNF144BQ7Z419 303 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 LIX1LQ8IVB5 337 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 PIAS4Q8N2W9 510 aaPredicted RBP12.16□□□□□ -0.46
SS18-201ENST00000269137 FTMTQ8N4E7 242 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 PNLDC1Q8NA58 520 aaKnown RBP12.16□□□□□ -0.46
SS18-201ENST00000269137 RELL2Q8NC24 303 aaPredicted RBP12.16□□□□□ -0.46
SS18-201ENST00000269137 CPNE2Q96FN4 548 aaPredicted RBP12.16□□□□□ -0.46
SS18-201ENST00000269137 SPACA5Q96QH8 159 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 C1QTNF6Q9BXI9 259 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 TUBG2Q9NRH3 451 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 RAB22AQ9UL26 194 aa12.16□□□□□ -0.46
SS18-201ENST00000269137 GGT3PA6NGU5 568 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 CD300LBA8K4G0 201 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 XRCC3O43542 346 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 CTAG2O75638 210 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 HLA-DQB1P01920 261 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 UBBP0CG47 229 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 NAT2P11245 290 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 CDK2P24941 298 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 MMP15P51511 669 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 UCP2P55851 309 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 PPP1CBP62140 327 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 SCN1BQ07699 218 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 FAM27E3Q08E93 113 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 AWAT2Q6E213 333 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 UNQ6126/PRO20091Q6UXV3 157 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 NCCRP1Q6ZVX7 275 aaPredicted RBP12.15□□□□□ -0.46
SS18-201ENST00000269137 OR2W3Q7Z3T1 314 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 DTX3Q8N9I9 347 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 C15orf40Q8WUR7 153 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 MUCL1Q96DR8 90 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 C1orf147Q96MC9 270 aaPredicted RBP12.15□□□□□ -0.46
SS18-201ENST00000269137 GPER1Q99527 375 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 NEURL2Q9BR09 285 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 KCNK15Q9H427 330 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 GHRLQ9UBU3 117 aa12.15□□□□□ -0.46
SS18-201ENST00000269137 MRPS28Q9Y2Q9 187 aaKnown RBP12.15□□□□□ -0.46
SS18-201ENST00000269137 COL6A6A6NMZ7 2263 aa12.15□□□□□ -0.47
SS18-201ENST00000269137 HEATR1Q9H583 2144 aaKnown RBP12.14□□□□□ -0.47
SS18-201ENST00000269137 A0A0A6YYH2 397 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 IGHV1-18A0A0C4DH31 117 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 A0A1W2PQ09 198 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 A6NJ64 397 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 PTGFRP43088 359 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 OR3A4PP47883 348 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 PTH2RP49190 550 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 FUT6P51993 359 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 DEFA1P59665 94 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 DEFA3P59666 94 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 TMEM69Q5SWH9 247 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 GLIPR1L1Q6UWM5 242 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 LHFPL2Q6ZUX7 228 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 C1orf174Q8IYL3 243 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 POC5Q8NA72 575 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 SETD6Q8TBK2 473 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 NPRL2Q8WTW4 380 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 ACTR6Q9GZN1 396 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 OR10A4Q9H209 315 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 DIABLOQ9NR28 239 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 SLC7A11Q9UPY5 501 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 MRPS7Q9Y2R9 242 aaKnown RBP12.14□□□□□ -0.47
SS18-201ENST00000269137 TMEM14DPA8MWL7 114 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 C16orf97H3BN30 126 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 GSTZ1O43708 216 aaPredicted RBP12.14□□□□□ -0.47
SS18-201ENST00000269137 VSIG8P0DPA2 414 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 RAD52P43351 418 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 RBP2P50120 134 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 MTCP1P56278 107 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 PPA1Q15181 289 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 TAB1Q15750 504 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 DMRTC1Q5HYR2 192 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 TRIQKQ629K1 86 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 SSX8Q7RTT4 187 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 BIVMQ86UB2 503 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 PIGCQ92535 297 aa12.14□□□□□ -0.47
SS18-201ENST00000269137 IGHV2OR16-5A0A0B4J2B6 119 aa12.13□□□□□ -0.47
SS18-201ENST00000269137 BOLA2-SMG1P6H3BVE0 249 aa12.13□□□□□ -0.47
SS18-201ENST00000269137 PTTG1O95997 202 aa12.13□□□□□ -0.47
SS18-201ENST00000269137 FAM157BP0CG42 384 aa12.13□□□□□ -0.47
SS18-201ENST00000269137 RAC2P15153 192 aa12.13□□□□□ -0.47
SS18-201ENST00000269137 ZP1P60852 638 aa12.13□□□□□ -0.47
SS18-201ENST00000269137 MRPS10P82664 201 aaKnown RBP12.13□□□□□ -0.47
SS18-201ENST00000269137 UNC119Q13432 240 aa12.13□□□□□ -0.47
SS18-201ENST00000269137 HACD4Q5VWC8 232 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms