RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 PTX4Q96A99 478 aa10.94□□□□□ -0.66
CHMP3-201ENST00000263856 CLCC1Q96S66 551 aa10.94□□□□□ -0.66
CHMP3-201ENST00000263856 RTBDNQ9BSG5 229 aaPredicted RBP10.94□□□□□ -0.66
CHMP3-201ENST00000263856 FANCFQ9NPI8 374 aa10.94□□□□□ -0.66
CHMP3-201ENST00000263856 SDHAF3Q9NRP4 125 aa10.94□□□□□ -0.66
CHMP3-201ENST00000263856 ZNF107Q9UII5 783 aaPredicted RBP10.94□□□□□ -0.66
CHMP3-201ENST00000263856 AMDHD2Q9Y303 409 aa10.94□□□□□ -0.66
CHMP3-201ENST00000263856 C9JQL5 133 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 G3V3Y1 287 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 SGCEO43556 437 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 ANGPTL7O43827 346 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 IGHG1P01857 330 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 HEXBP07686 556 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 CHRM2P08172 466 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 FAM157CP0CG43 387 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 CD79AP11912 226 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 ZNF43P17038 809 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 FCGR2CP31995 323 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 GUCA1AP43080 201 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-201ENST00000263856 PTGFRP43088 359 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 HOXA1P49639 335 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-201ENST00000263856 P2RY4P51582 365 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 SRSF4Q08170 494 aaKnown RBP10.93□□□□□ -0.66
CHMP3-201ENST00000263856 PDCD1Q15116 288 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 TMEM176BQ3YBM2 270 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-201ENST00000263856 TSPO2Q5TGU0 170 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 CD300LFQ8TDQ1 290 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 GLYATL2Q8WU03 294 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 C2orf50Q96LR7 162 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 JSRP1Q96MG2 331 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-201ENST00000263856 CDCA3Q99618 268 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-201ENST00000263856 FBXL17Q9UF56 701 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 DBX1A6NMT0 343 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 ZNF814B7Z6K7 855 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 F8VVB4 439 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 F8VWA3 439 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 C1QL1O75973 258 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 CSTBP04080 98 aaKnown RBP10.93□□□□□ -0.66
CHMP3-201ENST00000263856 HLA-GP17693 338 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 RPL12P30050 165 aaKnown RBP10.93□□□□□ -0.66
CHMP3-201ENST00000263856 GALNSP34059 522 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 MEOX2P50222 304 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 RRADP55042 308 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 ACY1Q03154 408 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 ZNF528Q3MIS6 628 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 DHRS7BQ6IAN0 325 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-201ENST00000263856 FAHD2BQ6P2I3 314 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-201ENST00000263856 MFSD8Q8NHS3 518 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 FNDC9Q8TBE3 224 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 DYRK2Q92630 601 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 FAHD2AQ96GK7 314 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 SEC11CQ9BY50 192 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 RAB18Q9NP72 206 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 PLEKHJ1Q9NW61 149 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 RCC2Q9P258 522 aaKnown RBP10.93□□□□□ -0.66
CHMP3-201ENST00000263856 B3GALT5Q9Y2C3 310 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 MEMO1Q9Y316 297 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 B3GALT1Q9Y5Z6 326 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 IGKV1D-8A0A087WSZ0 117 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 E9PLN8 166 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 PET100P0DJ07 73 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 RD3LP0DJH9 198 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 TMEM225BP0DP42 221 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 FPR2P25090 351 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 ADH6P28332 368 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 FHITP49789 147 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 RAB5BP61020 215 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 LYPD6Q86Y78 171 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 SULF2Q8IWU5 870 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 OR10G3Q8NGC4 313 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 MRPL38Q96DV4 380 aaKnown RBP10.93□□□□□ -0.66
CHMP3-201ENST00000263856 REEP6Q96HR9 211 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 RSRP1Q9BUV0 290 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 ZNF160Q9HCG1 818 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 WIF1Q9Y5W5 379 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 CPAMD8Q8IZJ3 1885 aa10.93□□□□□ -0.66
CHMP3-201ENST00000263856 CCDC163A0A0D9SF12 145 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 A0A1B0GX78 115 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 LILRA5A6NI73 299 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 LIPT2A6NK58 231 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 CCDC85CA6NKD9 419 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 EFNA2O43921 213 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 MTRF1O75570 445 aaKnown RBP10.92□□□□□ -0.66
CHMP3-201ENST00000263856 EIF3GO75821 320 aaKnown RBP eCLIP10.92□□□□□ -0.66
CHMP3-201ENST00000263856 TSPAN15O95858 294 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 IGHMP01871 453 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 HPNP05981 417 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 GSTP1P09211 210 aaKnown RBP10.92□□□□□ -0.66
CHMP3-201ENST00000263856 ZNF14P17017 642 aaPredicted RBP10.92□□□□□ -0.66
CHMP3-201ENST00000263856 CLDN17P56750 224 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 KISS1Q15726 138 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 PHLDA2Q53GA4 152 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 COL13A1Q5TAT6 717 aaPredicted RBP10.92□□□□□ -0.66
CHMP3-201ENST00000263856 DEGS2Q6QHC5 323 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 DHRS11Q6UWP2 260 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 ARRDC1Q8N5I2 433 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 HSD17B11Q8NBQ5 300 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 ZNF285Q96NJ3 590 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 SLC26A1Q9H2B4 701 aa10.92□□□□□ -0.66
CHMP3-201ENST00000263856 IFT22Q9H7X7 185 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms