RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 FOXI3A8MTJ6 420 aaPredicted RBP13.4□□□□□ -0.26
DDX56-201ENST00000258772 SDCBPO00560 298 aaPredicted RBP13.4□□□□□ -0.26
DDX56-201ENST00000258772 ATG12O94817 140 aa13.4□□□□□ -0.26
DDX56-201ENST00000258772 CD79AP11912 226 aa13.4□□□□□ -0.26
DDX56-201ENST00000258772 LYL1P12980 280 aa13.4□□□□□ -0.26
DDX56-201ENST00000258772 ALDH3B1P43353 468 aa13.4□□□□□ -0.26
DDX56-201ENST00000258772 SNU13P55769 128 aaKnown RBP13.4□□□□□ -0.26
DDX56-201ENST00000258772 CCL7P80098 99 aa13.4□□□□□ -0.26
DDX56-201ENST00000258772 PDSS1Q5T2R2 415 aa13.4□□□□□ -0.26
DDX56-201ENST00000258772 Q7L0L9 218 aa13.4□□□□□ -0.26
DDX56-201ENST00000258772 SLC6A15Q9H2J7 730 aa13.4□□□□□ -0.26
DDX56-201ENST00000258772 AKIRIN1Q9H9L7 192 aaPredicted RBP13.4□□□□□ -0.26
DDX56-201ENST00000258772 ZNF160Q9HCG1 818 aa13.4□□□□□ -0.26
DDX56-201ENST00000258772 GHRLQ9UBU3 117 aa13.4□□□□□ -0.26
DDX56-201ENST00000258772 STMND1H3BQB6 276 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 GLRA1P23415 457 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 BLVRBP30043 206 aaPredicted RBP13.39□□□□□ -0.27
DDX56-201ENST00000258772 CSNK2A1P68400 391 aaPredicted RBP13.39□□□□□ -0.27
DDX56-201ENST00000258772 AIMP2Q13155 320 aaKnown RBP13.39□□□□□ -0.27
DDX56-201ENST00000258772 EIF3IQ13347 325 aaKnown RBP13.39□□□□□ -0.27
DDX56-201ENST00000258772 PRSS54Q6PEW0 395 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 CLRN3Q8NCR9 226 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 BHLHE23Q8NDY6 225 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 CSNK2A3Q8NEV1 391 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 PAQR8Q8TEZ7 354 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 NPRL2Q8WTW4 380 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 RNF141Q8WVD5 230 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 OR10C1Q96KK4 312 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 MSGN1A6NI15 193 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 F5H5K5 113 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 HTR3BO95264 441 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 GUCA1AP43080 201 aaPredicted RBP13.39□□□□□ -0.27
DDX56-201ENST00000258772 AKR1C2P52895 323 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 STARD6P59095 220 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 TAS2R46P59540 309 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 H3F3AP84243 136 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 AKR1C1Q04828 323 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 UBE2V2Q15819 145 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 NKAPLQ5M9Q1 402 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 GJC3Q8NFK1 279 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 SLC26A1Q9H2B4 701 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 METTL8Q9H825 291 aaKnown RBP13.39□□□□□ -0.27
DDX56-201ENST00000258772 OR5AC2Q9NZP5 309 aa13.39□□□□□ -0.27
DDX56-201ENST00000258772 CNTRLQ7Z7A1 2325 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 TP53I11O14683 189 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 RPS2P15880 293 aaKnown RBP13.38□□□□□ -0.27
DDX56-201ENST00000258772 MSR1P21757 451 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 CSNK1A1P48729 337 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 PABPC1L2AQ5JQF8 200 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 PHYHD1Q5SRE7 291 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 PPP1R3BQ86XI6 285 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 RHBDD1Q8TEB9 315 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 TMED6Q8WW62 240 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 MAFIPQ8WZ33 124 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 PECRQ9BY49 303 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 NELFAQ9H3P2 528 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 SLC39A1Q9NY26 324 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 EHFQ9NZC4 300 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 LY6G6EA0A0G2JKS1 128 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 A0A0U1RQV5 110 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 ABCD4O14678 606 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 DHRS3O75911 302 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 FAM157CP0CG43 387 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 NR2C1P13056 603 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 ICAM2P13598 275 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 SERPINA2P20848 420 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 THBS4P35443 961 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 SLC6A9P48067 706 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 ENDOGQ14249 297 aaKnown RBP13.38□□□□□ -0.27
DDX56-201ENST00000258772 RSPO1Q2MKA7 263 aaPredicted RBP13.38□□□□□ -0.27
DDX56-201ENST00000258772 CCDC157Q569K6 752 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 C10orf128Q5T292 105 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 MRPL14Q6P1L8 145 aaKnown RBP13.38□□□□□ -0.27
DDX56-201ENST00000258772 DTX1Q86Y01 620 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 C2orf50Q96LR7 162 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 TSNAXQ99598 290 aaKnown RBP13.38□□□□□ -0.27
DDX56-201ENST00000258772 PCDHB16Q9NRJ7 776 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 U3KQA8 63 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 V9GYS6 101 aa13.38□□□□□ -0.27
DDX56-201ENST00000258772 OR5H15A6NDH6 313 aa13.37□□□□□ -0.27
DDX56-201ENST00000258772 ACTL6AO96019 429 aa13.37□□□□□ -0.27
DDX56-201ENST00000258772 HPNP05981 417 aa13.37□□□□□ -0.27
DDX56-201ENST00000258772 FCGR2AP12318 317 aa13.37□□□□□ -0.27
DDX56-201ENST00000258772 FAHP16930 419 aa13.37□□□□□ -0.27
DDX56-201ENST00000258772 IL15RAQ13261 267 aa13.37□□□□□ -0.27
DDX56-201ENST00000258772 RAB32Q13637 225 aa13.37□□□□□ -0.27
DDX56-201ENST00000258772 STK11Q15831 433 aa13.37□□□□□ -0.27
DDX56-201ENST00000258772 NSUN5P2Q63ZY6 315 aa13.37□□□□□ -0.27
DDX56-201ENST00000258772 SLC16A14Q7RTX9 510 aa13.37□□□□□ -0.27
DDX56-201ENST00000258772 TDHQ8IZJ6 230 aa13.37□□□□□ -0.27
DDX56-201ENST00000258772 OR5T2Q8NGG2 359 aa13.37□□□□□ -0.27
DDX56-201ENST00000258772 EMG1Q92979 244 aaKnown RBP13.37□□□□□ -0.27
DDX56-201ENST00000258772 CCDC74BQ96LY2 380 aa13.37□□□□□ -0.27
DDX56-201ENST00000258772 AQP10Q96PS8 301 aa13.37□□□□□ -0.27
DDX56-201ENST00000258772 DUSP23Q9BVJ7 150 aa13.37□□□□□ -0.27
DDX56-201ENST00000258772 PURGQ9UJV8 347 aaKnown RBP13.37□□□□□ -0.27
DDX56-201ENST00000258772 SERPINE3A8MV23 424 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 GPR31O00270 319 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 ADCYAP1P18509 176 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 ZNF585AQ6P3V2 769 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms