RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 FLVCR1Q9Y5Y0 555 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 GPR179Q6PRD1 2367 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 CEP250Q9BV73 2442 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 NPIPA2E9PIF3 369 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 NPIPA3F8WFD2 350 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 GLB1P16278 677 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 NPBWR1P48145 328 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 GPR85P60893 370 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 MOB3CQ70IA8 216 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 LDLRAD3Q86YD5 345 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 D2HGDHQ8N465 521 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 PIK3IP1Q96FE7 263 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 TWSG1Q9GZX9 223 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 DNTTIP1Q9H147 329 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 B3GAT1Q9P2W7 334 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 LDLRAD4O15165 306 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 TMEM127O75204 238 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 CFIP05156 583 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 CSNK1A1P48729 337 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 SSBP1Q04837 148 aaKnown RBP11.91□□□□□ -0.5
VHL-201ENST00000256474 LPCAT3Q6P1A2 487 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 MEX3BQ6ZN04 569 aaKnown RBP11.91□□□□□ -0.5
VHL-201ENST00000256474 NOXO1Q8NFA2 376 aa11.91□□□□□ -0.5
VHL-201ENST00000256474 ZC3H10Q96K80 434 aaKnown RBP11.91□□□□□ -0.5
VHL-201ENST00000256474 ZNF385AQ96PM9 386 aaKnown RBP11.91□□□□□ -0.5
VHL-201ENST00000256474 TNFSF12O43508 249 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 TLX3O43711 291 aaPredicted RBP11.9□□□□□ -0.5
VHL-201ENST00000256474 ZFAND5O76080 213 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 CD8AP01732 235 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 RAB6AP20340 208 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 GALNSP34059 522 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 MTCP1P56278 107 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 PCK2Q16822 640 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 OR5AS1Q8N127 324 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 SVBPQ8N300 66 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 OR13G1Q8NGZ3 307 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 RNF141Q8WVD5 230 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 FAAP24Q9BTP7 215 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 MYOTQ9UBF9 498 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 PCDHGA1Q9Y5H4 931 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 DSPP15924 2871 aaKnown RBP11.9□□□□□ -0.5
VHL-201ENST00000256474 SRSF10O75494 262 aaKnown RBP11.9□□□□□ -0.5
VHL-201ENST00000256474 THEM4Q5T1C6 240 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 PLXDC2Q6UX71 529 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 SUMF1Q8NBK3 374 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 OR56B1Q8NGI3 324 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 MR1Q95460 341 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 FBXO17Q96EF6 278 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 ZNF837Q96EG3 531 aaPredicted RBP11.9□□□□□ -0.5
VHL-201ENST00000256474 GPHA2Q96T91 129 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 CMSS1Q9BQ75 279 aaKnown RBP11.9□□□□□ -0.5
VHL-201ENST00000256474 PI4KAP42356 2102 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 TRAPPC6AO75865 159 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 LCATP04180 440 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 ISG15P05161 165 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 DCDP81605 110 aaKnown RBP11.9□□□□□ -0.5
VHL-201ENST00000256474 TGIF1Q15583 401 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 FAM76BQ5HYJ3 339 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 ZDHHC22Q8N966 263 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 WIF1Q9Y5W5 379 aa11.9□□□□□ -0.5
VHL-201ENST00000256474 IGKV1D-8A0A087WSZ0 117 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 IGKV1-9A0A0C4DH69 117 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 M0R036 132 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 NME2P1O60361 137 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 DAOP14920 347 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 SMCO1Q147U7 214 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 ABCA11PQ4W5N1 156 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 RNF126Q9BV68 326 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 FER1L5A0AVI2 2057 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 BOD1L1Q8NFC6 3051 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 TO15178 435 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 MTRF1O75570 445 aaKnown RBP11.89□□□□□ -0.51
VHL-201ENST00000256474 ACY1Q03154 408 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 PDZK1IP1Q13113 114 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 PLPPR5Q32ZL2 321 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 OGFOD3Q6PK18 319 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 CPEB2Q7Z5Q1 589 aaKnown RBP11.89□□□□□ -0.51
VHL-201ENST00000256474 SULF2Q8IWU5 870 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 OR5L1Q8NGL2 311 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 TMEM230Q96A57 120 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 NECAB3Q96P71 396 aaPredicted RBP11.89□□□□□ -0.51
VHL-201ENST00000256474 NCOA6Q14686 2063 aaPredicted RBP11.89□□□□□ -0.51
VHL-201ENST00000256474 OMGP23515 440 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 PTGFRP43088 359 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 CCL7P80098 99 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 ZNF574Q6ZN55 896 aaPredicted RBP11.89□□□□□ -0.51
VHL-201ENST00000256474 HSD17B11Q8NBQ5 300 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 OR5L2Q8NGL0 311 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 POC1BQ8TC44 478 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 EDEM2Q9BV94 578 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 TAF9BQ9HBM6 251 aa11.89□□□□□ -0.51
VHL-201ENST00000256474 TPRP12270 2363 aaKnown RBP11.89□□□□□ -0.51
VHL-201ENST00000256474 ADCYAP1P18509 176 aa11.88□□□□□ -0.51
VHL-201ENST00000256474 AFF3P51826 1226 aaKnown RBP11.88□□□□□ -0.51
VHL-201ENST00000256474 RSU1Q15404 277 aa11.88□□□□□ -0.51
VHL-201ENST00000256474 YRDCQ86U90 279 aaKnown RBP11.88□□□□□ -0.51
VHL-201ENST00000256474 HOGA1Q86XE5 327 aa11.88□□□□□ -0.51
VHL-201ENST00000256474 AKR7LQ8NHP1 331 aa11.88□□□□□ -0.51
VHL-201ENST00000256474 ALKBH3Q96Q83 286 aaPredicted RBP11.88□□□□□ -0.51
VHL-201ENST00000256474 RASL10BQ96S79 203 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms