RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 R4GMQ9 66 aa19.13■□□□□ 0.65
LSM4-201ENST00000252816 IGHV3OR15-7A0A075B7D8 119 aa19.12■□□□□ 0.65
LSM4-201ENST00000252816 TRAV38-1A0A0B4J264 116 aa19.12■□□□□ 0.65
LSM4-201ENST00000252816 LOC110117498-PIK3R3F6TDL0 507 aa19.12■□□□□ 0.65
LSM4-201ENST00000252816 CDIPTO14735 213 aa19.12■□□□□ 0.65
LSM4-201ENST00000252816 GYPAP02724 150 aa19.12■□□□□ 0.65
LSM4-201ENST00000252816 MAP2K3P46734 347 aa19.12■□□□□ 0.65
LSM4-201ENST00000252816 PAX8Q06710 450 aa19.12■□□□□ 0.65
LSM4-201ENST00000252816 POU4F2Q12837 409 aa19.12■□□□□ 0.65
LSM4-201ENST00000252816 KCNJ8Q15842 424 aa19.12■□□□□ 0.65
LSM4-201ENST00000252816 COMMD2Q86X83 199 aa19.12■□□□□ 0.65
LSM4-201ENST00000252816 ZDHHC23Q8IYP9 409 aa19.12■□□□□ 0.65
LSM4-201ENST00000252816 PQLC1Q8N2U9 271 aa19.12■□□□□ 0.65
LSM4-201ENST00000252816 TRUB1Q8WWH5 349 aaKnown RBP19.12■□□□□ 0.65
LSM4-201ENST00000252816 SLC29A1Q99808 456 aa19.12■□□□□ 0.65
LSM4-201ENST00000252816 RTL8AQ9BWD3 113 aa19.12■□□□□ 0.65
LSM4-201ENST00000252816 ABCB9Q9NP78 766 aa19.12■□□□□ 0.65
LSM4-201ENST00000252816 IMPAD1Q9NX62 359 aa19.12■□□□□ 0.65
LSM4-201ENST00000252816 AUP1Q9Y679 476 aa19.12■□□□□ 0.65
LSM4-201ENST00000252816 DOCK11Q5JSL3 2073 aa19.12■□□□□ 0.65
LSM4-201ENST00000252816 IGHV2-70DA0A0C4DH43 119 aa19.11■□□□□ 0.65
LSM4-201ENST00000252816 ZNF816-ZNF321PA0A0X1KG74 233 aa19.11■□□□□ 0.65
LSM4-201ENST00000252816 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.11■□□□□ 0.65
LSM4-201ENST00000252816 RGS9O75916 674 aaPredicted RBP19.11■□□□□ 0.65
LSM4-201ENST00000252816 OR2T7P0C7T2 308 aa19.11■□□□□ 0.65
LSM4-201ENST00000252816 TMED1Q13445 227 aa19.11■□□□□ 0.65
LSM4-201ENST00000252816 FAM76BQ5HYJ3 339 aa19.11■□□□□ 0.65
LSM4-201ENST00000252816 ZNF684Q5T5D7 378 aa19.11■□□□□ 0.65
LSM4-201ENST00000252816 LIPNQ5VXI9 398 aa19.11■□□□□ 0.65
LSM4-201ENST00000252816 TEX36Q5VZQ5 186 aa19.11■□□□□ 0.65
LSM4-201ENST00000252816 SEMA6DQ8NFY4 1073 aa19.11■□□□□ 0.65
LSM4-201ENST00000252816 OR10H4Q8NGA5 316 aa19.11■□□□□ 0.65
LSM4-201ENST00000252816 OR2T27Q8NH04 317 aa19.11■□□□□ 0.65
LSM4-201ENST00000252816 RAB40AQ8WXH6 277 aa19.11■□□□□ 0.65
LSM4-201ENST00000252816 RPL3LQ92901 407 aaKnown RBP19.11■□□□□ 0.65
LSM4-201ENST00000252816 RFKQ969G6 155 aa19.11■□□□□ 0.65
LSM4-201ENST00000252816 RNF170Q96K19 258 aa19.11■□□□□ 0.65
LSM4-201ENST00000252816 OR52A1Q9UKL2 312 aa19.11■□□□□ 0.65
LSM4-201ENST00000252816 GTF2A1LQ9UNN4 478 aa19.11■□□□□ 0.65
LSM4-201ENST00000252816 TMEM210A6NLX4 147 aa19.1■□□□□ 0.65
LSM4-201ENST00000252816 ADAM20O43506 726 aa19.1■□□□□ 0.65
LSM4-201ENST00000252816 ENTPD6O75354 484 aa19.1■□□□□ 0.65
LSM4-201ENST00000252816 FCN3O75636 299 aa19.1■□□□□ 0.65
LSM4-201ENST00000252816 ATP6V1B1P15313 513 aa19.1■□□□□ 0.65
LSM4-201ENST00000252816 CFHR2P36980 270 aa19.1■□□□□ 0.65
LSM4-201ENST00000252816 ELF3P78545 371 aaPredicted RBP19.1■□□□□ 0.65
LSM4-201ENST00000252816 SCGB2A2Q13296 93 aa19.1■□□□□ 0.65
LSM4-201ENST00000252816 DMRTC1Q5HYR2 192 aa19.1■□□□□ 0.65
LSM4-201ENST00000252816 KLF17Q5JT82 389 aaPredicted RBP19.1■□□□□ 0.65
LSM4-201ENST00000252816 CEP78Q5JTW2 689 aa19.1■□□□□ 0.65
LSM4-201ENST00000252816 BCL2L15Q5TBC7 163 aa19.1■□□□□ 0.65
LSM4-201ENST00000252816 ELMOD2Q8IZ81 293 aa19.1■□□□□ 0.65
LSM4-201ENST00000252816 SEH1LQ96EE3 360 aa19.1■□□□□ 0.65
LSM4-201ENST00000252816 C9orf16Q9BUW7 83 aa19.1■□□□□ 0.65
LSM4-201ENST00000252816 MRI1Q9BV20 369 aa19.1■□□□□ 0.65
LSM4-201ENST00000252816 C19orf24Q9BVV8 132 aa19.1■□□□□ 0.65
LSM4-201ENST00000252816 MOB1AQ9H8S9 216 aa19.1■□□□□ 0.65
LSM4-201ENST00000252816 TRIM36Q9NQ86 728 aa19.1■□□□□ 0.65
LSM4-201ENST00000252816 AASSQ9UDR5 926 aa19.1■□□□□ 0.65
LSM4-201ENST00000252816 A0A1B0GTI1 187 aa19.09■□□□□ 0.65
LSM4-201ENST00000252816 C22orf46C9J442 243 aa19.09■□□□□ 0.65
LSM4-201ENST00000252816 RPP14O95059 124 aaKnown RBP19.09■□□□□ 0.65
LSM4-201ENST00000252816 VENTXO95231 258 aa19.09■□□□□ 0.65
LSM4-201ENST00000252816 KRT8P05787 483 aa19.09■□□□□ 0.65
LSM4-201ENST00000252816 FAHP16930 419 aa19.09■□□□□ 0.65
LSM4-201ENST00000252816 ATP6V1E1P36543 226 aa19.09■□□□□ 0.65
LSM4-201ENST00000252816 SNRPGP62308 76 aaKnown RBP19.09■□□□□ 0.65
LSM4-201ENST00000252816 RIPPLY1Q0D2K3 151 aa19.09■□□□□ 0.65
LSM4-201ENST00000252816 SLC25A30Q5SVS4 291 aa19.09■□□□□ 0.65
LSM4-201ENST00000252816 KCTD8Q6ZWB6 473 aa19.09■□□□□ 0.65
LSM4-201ENST00000252816 YIPF7Q8N8F6 280 aa19.09■□□□□ 0.65
LSM4-201ENST00000252816 SCCPDHQ8NBX0 429 aa19.09■□□□□ 0.65
LSM4-201ENST00000252816 ITFG2Q969R8 447 aa19.09■□□□□ 0.65
LSM4-201ENST00000252816 RASSF4Q9H2L5 321 aa19.09■□□□□ 0.65
LSM4-201ENST00000252816 SMURF1Q9HCE7 757 aa19.09■□□□□ 0.65
LSM4-201ENST00000252816 SLC22A13Q9Y226 551 aa19.09■□□□□ 0.65
LSM4-201ENST00000252816 PIGLQ9Y2B2 252 aa19.09■□□□□ 0.65
LSM4-201ENST00000252816 SNX5Q9Y5X3 404 aa19.09■□□□□ 0.65
LSM4-201ENST00000252816 KIR2DS1A0A191URI9 304 aa19.08■□□□□ 0.64
LSM4-201ENST00000252816 SRRM5B3KS81 715 aa19.08■□□□□ 0.64
LSM4-201ENST00000252816 NDUFA2O43678 99 aa19.08■□□□□ 0.64
LSM4-201ENST00000252816 DHRS3O75911 302 aa19.08■□□□□ 0.64
LSM4-201ENST00000252816 MTNR1AP48039 350 aa19.08■□□□□ 0.64
LSM4-201ENST00000252816 GPM6AP51674 278 aa19.08■□□□□ 0.64
LSM4-201ENST00000252816 ZNF85Q03923 595 aa19.08■□□□□ 0.64
LSM4-201ENST00000252816 CEACAM21Q3KPI0 293 aa19.08■□□□□ 0.64
LSM4-201ENST00000252816 ZBTB37Q5TC79 503 aa19.08■□□□□ 0.64
LSM4-201ENST00000252816 BTNL3Q6UXE8 466 aa19.08■□□□□ 0.64
LSM4-201ENST00000252816 ZBTB49Q6ZSB9 765 aa19.08■□□□□ 0.64
LSM4-201ENST00000252816 THAP5Q7Z6K1 395 aa19.08■□□□□ 0.64
LSM4-201ENST00000252816 C22orf15Q8WYQ4 148 aa19.08■□□□□ 0.64
LSM4-201ENST00000252816 TECTBQ96PL2 329 aa19.08■□□□□ 0.64
LSM4-201ENST00000252816 HIST1H2AAQ96QV6 131 aa19.08■□□□□ 0.64
LSM4-201ENST00000252816 SLC6A7Q99884 636 aa19.08■□□□□ 0.64
LSM4-201ENST00000252816 NUDT16L1Q9BRJ7 211 aaKnown RBP19.08■□□□□ 0.64
LSM4-201ENST00000252816 ERVK-18Q9QC07 812 aa19.08■□□□□ 0.64
LSM4-201ENST00000252816 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.08■□□□□ 0.64
LSM4-201ENST00000252816 METTL15A6NJ78 407 aa19.07■□□□□ 0.64
LSM4-201ENST00000252816 P2RY10O00398 339 aa19.07■□□□□ 0.64
LSM4-201ENST00000252816 BAG2O95816 211 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms