RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 SULF2Q8IWU5 870 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 GLYATL2Q8WU03 294 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 TMEM234Q8WY98 164 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 LPAR3Q9UBY5 353 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 RFNGQ9Y644 331 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 H3BMH7 237 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 CSTBP04080 98 aaKnown RBP10.6□□□□□ -0.71
USHBP1-201ENST00000252597 IGHV4-34P06331 123 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 FOLR1P15328 257 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 ZNF41P51814 821 aaPredicted RBP10.6□□□□□ -0.71
USHBP1-201ENST00000252597 YPEL5P62699 121 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 SPIN3Q5JUX0 258 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 EIF5AL1Q6IS14 154 aaKnown RBP10.6□□□□□ -0.71
USHBP1-201ENST00000252597 UEVLDQ8IX04 471 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 KIRREL1Q96J84 757 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 A0A1W2PPE2 198 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 SPRY1O43609 319 aaPredicted RBP10.6□□□□□ -0.71
USHBP1-201ENST00000252597 TXNDC12O95881 172 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 SLC25A4P12235 298 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 ZNF43P17038 809 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 CSRP1P21291 193 aaKnown RBP10.6□□□□□ -0.71
USHBP1-201ENST00000252597 CCNOP22674 350 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 CX3CR1P49238 355 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 NOVA1P51513 510 aaKnown RBP10.6□□□□□ -0.71
USHBP1-201ENST00000252597 TEX30Q5JUR7 227 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 DHRS11Q6UWP2 260 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 TMEM217Q8N7C4 229 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 NKAIN3Q8N8D7 197 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 AQP3Q92482 292 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 OR10A2Q9H208 303 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 ZNF160Q9HCG1 818 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 ZNF319Q9P2F9 582 aa10.6□□□□□ -0.71
USHBP1-201ENST00000252597 A0A1W2PPE3 182 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 ATXN7O15265 892 aaPredicted RBP10.59□□□□□ -0.71
USHBP1-201ENST00000252597 RAMP1O60894 148 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 DDAH2O95865 285 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 DBHP09172 617 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 PATE4P0C8F1 98 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 PNLIPP16233 465 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 HIST1H1DP16402 221 aaKnown RBP10.59□□□□□ -0.71
USHBP1-201ENST00000252597 LAP3P28838 519 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 HOXA1P49639 335 aaPredicted RBP10.59□□□□□ -0.71
USHBP1-201ENST00000252597 DAP3P51398 398 aaKnown RBP10.59□□□□□ -0.71
USHBP1-201ENST00000252597 TMEM33P57088 247 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 ZNF345Q14585 488 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 C17orf78Q8N4C9 275 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 EIF4E3Q8N5X7 224 aaKnown RBP10.59□□□□□ -0.71
USHBP1-201ENST00000252597 OR8B12Q8NGG6 310 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 OR2AE1Q8NHA4 323 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 GABRG3Q99928 467 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 VN1R1Q9GZP7 353 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 ADAM19Q9H013 955 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 MAGT1Q9H0U3 335 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 LPAR5Q9H1C0 372 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 MMP26Q9NRE1 261 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 SDHAF3Q9NRP4 125 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 MEMO1Q9Y316 297 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 RALGAPA1Q6GYQ0 2036 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 ATG2AQ2TAZ0 1938 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 CACNA1DQ01668 2161 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 TRBV11-1A0A0K0K1C0 115 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 MEX3AA1L020 520 aaKnown RBP10.59□□□□□ -0.71
USHBP1-201ENST00000252597 RAB19A4D1S5 217 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 FRG2CA6NGY1 282 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 GPR37O15354 613 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 FABP1P07148 127 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 QDPRP09417 244 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 ZNF813Q6ZN06 617 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 MISPQ8IVT2 679 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 ZNF565Q8N9K5 539 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 OR13G1Q8NGZ3 307 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 LILRB1Q8NHL6 650 aaPredicted RBP10.59□□□□□ -0.71
USHBP1-201ENST00000252597 AKR7LQ8NHP1 331 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 ZNF721Q8TF20 911 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 MRPL24Q96A35 216 aaKnown RBP10.59□□□□□ -0.71
USHBP1-201ENST00000252597 CDCA3Q99618 268 aaPredicted RBP10.59□□□□□ -0.71
USHBP1-201ENST00000252597 UQCC2Q9BRT2 126 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 GPR173Q9NS66 373 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 OBP2AQ9NY56 170 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 PCDH15Q96QU1 1955 aa10.59□□□□□ -0.71
USHBP1-201ENST00000252597 A0A0A6YYD4 124 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 MS4A18H0YCH9 400 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 CDC14BO60729 498 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 LY86O95711 162 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 MT-ATP6P00846 226 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 CLDN17P56750 224 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 GABREP78334 506 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 MS4A18Q3C1V0 323 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 AWAT1Q58HT5 328 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 C9orf152Q5JTZ5 239 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 SLC25A24Q6NUK1 477 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 TMEM182Q6ZP80 229 aaPredicted RBP10.58□□□□□ -0.72
USHBP1-201ENST00000252597 SGPP2Q8IWX5 399 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 OR1L3Q8NH93 324 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 KCNG3Q8TAE7 436 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 ZNF519Q8TB69 540 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 NEK7Q8TDX7 302 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 TCEAL3Q969E4 200 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 SLC17A5Q9NRA2 495 aa10.58□□□□□ -0.72
USHBP1-201ENST00000252597 SMCO4Q9NRQ5 59 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms