RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 DPY19L4Q7Z388 723 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 AQP11Q8NBQ7 271 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 OR2T33Q8NG76 320 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 OR52H1Q8NGJ2 320 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 TNFRSF14Q92956 283 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 UTP4Q969X6 686 aaKnown RBP8.46□□□□□ -1.06
VPS50-201ENST00000251739 SEH1LQ96EE3 360 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 WDR89Q96FK6 387 aaPredicted RBP8.46□□□□□ -1.06
VPS50-201ENST00000251739 REEP6Q96HR9 211 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 CCL13Q99616 98 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 DCTN5Q9BTE1 182 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 ABHD6Q9BV23 337 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 TSSK6Q9BXA6 273 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 FGF23Q9GZV9 251 aaPredicted RBP8.46□□□□□ -1.06
VPS50-201ENST00000251739 DNTTIP1Q9H147 329 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 SEMA6AQ9H2E6 1030 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 CMC2Q9NRP2 79 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 CENPMQ9NSP4 180 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 ARL8BQ9NVJ2 186 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 ACTR3BQ9P1U1 418 aa8.46□□□□□ -1.06
VPS50-201ENST00000251739 A0A0G2JK05 382 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 SLC22A31A6NKX4 558 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 TSPAN9O75954 239 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 CCNB2O95067 398 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 SOX14O95416 240 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 TSPAN15O95858 294 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 FBP1P09467 338 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 CFL1P23528 166 aaKnown RBP8.45□□□□□ -1.06
VPS50-201ENST00000251739 ACKR3P25106 362 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 DCTDP32321 178 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 GRK5P34947 590 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 ZNF121P58317 390 aaPredicted RBP8.45□□□□□ -1.06
VPS50-201ENST00000251739 PPP1R8Q12972 351 aaKnown RBP8.45□□□□□ -1.06
VPS50-201ENST00000251739 TAF13Q15543 124 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 TIGD6Q17RP2 521 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 FAM76BQ5HYJ3 339 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 GDPGP1Q6ZNW5 385 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 KRT74Q7RTS7 529 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 SLC36A1Q7Z2H8 476 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 PDZD9Q8IXQ8 264 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 TIGD4Q8IY51 512 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 DEFB107AQ8IZN7 70 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 GALNT4Q8N4A0 578 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 SCCPDHQ8NBX0 429 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 CSNK2A3Q8NEV1 391 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 OR6K6Q8NGW6 343 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 OR10Z1Q8NGY1 313 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 OR8S1Q8NH09 359 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 NPRL2Q8WTW4 380 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 HPSE2Q8WWQ2 592 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 LRTOMTQ8WZ04 291 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 RAB3IPQ96QF0 476 aaPredicted RBP8.45□□□□□ -1.06
VPS50-201ENST00000251739 CCT8L2Q96SF2 557 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 INTS14Q96SY0 518 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 RGCCQ9H4X1 137 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 MAGIXQ9H6Y5 334 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 ARMC1Q9NVT9 282 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 TAGLN3Q9UI15 199 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 VPREB3Q9UKI3 123 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 RHBDD3Q9Y3P4 386 aa8.45□□□□□ -1.06
VPS50-201ENST00000251739 RIIAD1A6NNX1 92 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 CDIPTO14735 213 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 TBX1O43435 398 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 APOC1P02654 83 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 ANXA2P07355 339 aaKnown RBP8.44□□□□□ -1.06
VPS50-201ENST00000251739 NAA10P41227 235 aaPredicted RBP8.44□□□□□ -1.06
VPS50-201ENST00000251739 EIF2B1Q14232 305 aaKnown RBP8.44□□□□□ -1.06
VPS50-201ENST00000251739 MICAQ29983 383 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 LCN8Q6JVE9 175 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 CYP2R1Q6VVX0 501 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 ZNF788Q6ZQV5 615 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 C1orf122Q6ZSJ8 110 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 FAM57BQ71RH2 274 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 ANGPTL6Q8NI99 470 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 GAFA1Q96PS6 74 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 PAPOLGQ9BWT3 736 aaKnown RBP8.44□□□□□ -1.06
VPS50-201ENST00000251739 FAM107BQ9H098 131 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 WDR13Q9H1Z4 485 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 DPAGT1Q9H3H5 408 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 SP140LQ9H930 580 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 MED20Q9H944 212 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 SIRT7Q9NRC8 400 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 NDE1Q9NXR1 346 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 HAO2Q9NYQ3 351 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 ONECUT1Q9UBC0 465 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 N6AMT1Q9Y5N5 214 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 MPC1Q9Y5U8 109 aa8.44□□□□□ -1.06
VPS50-201ENST00000251739 FAM183AA6NL82 134 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 TMEM210A6NLX4 147 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 NPFFO15130 113 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 SIGLEC5O15389 551 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 NDUFB3O43676 98 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 GLCEO94923 617 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 CST4P01036 141 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 IFNGP01579 166 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 ZNF3P17036 446 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 HSD11B1P28845 292 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 SAA4P35542 130 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 DLX1P56177 255 aa8.43□□□□□ -1.06
VPS50-201ENST00000251739 CAV3P56539 151 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms