RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 S100A8P05109 93 aa18.14■□□□□ 0.5
SNX3-201ENST00000230085 SMIM6P0DI80 62 aa18.14■□□□□ 0.5
SNX3-201ENST00000230085 PET100P0DJ07 73 aa18.14■□□□□ 0.5
SNX3-201ENST00000230085 GP1BBP13224 206 aa18.14■□□□□ 0.5
SNX3-201ENST00000230085 WT1P19544 449 aaPredicted RBP18.14■□□□□ 0.5
SNX3-201ENST00000230085 PMELP40967 661 aa18.14■□□□□ 0.5
SNX3-201ENST00000230085 EFNA3P52797 238 aa18.14■□□□□ 0.5
SNX3-201ENST00000230085 SLC26A5P58743 744 aa18.14■□□□□ 0.5
SNX3-201ENST00000230085 SPOCK1Q08629 439 aa18.14■□□□□ 0.5
SNX3-201ENST00000230085 RNF212Q495C1 297 aa18.14■□□□□ 0.5
SNX3-201ENST00000230085 UNQ6126/PRO20091Q6UXV3 157 aa18.14■□□□□ 0.5
SNX3-201ENST00000230085 SPACA3Q8IXA5 215 aa18.14■□□□□ 0.5
SNX3-201ENST00000230085 ACBD4Q8NC06 268 aa18.14■□□□□ 0.5
SNX3-201ENST00000230085 ADAD2Q8NCV1 583 aaKnown RBP18.14■□□□□ 0.5
SNX3-201ENST00000230085 OR10R2Q8NGX6 335 aa18.14■□□□□ 0.5
SNX3-201ENST00000230085 RNF133Q8WVZ7 376 aa18.14■□□□□ 0.5
SNX3-201ENST00000230085 RRNAD1Q96FB5 475 aaKnown RBP18.14■□□□□ 0.5
SNX3-201ENST00000230085 EMC9Q9Y3B6 208 aa18.14■□□□□ 0.5
SNX3-201ENST00000230085 RRP8O43159 456 aaKnown RBP18.14■□□□□ 0.49
SNX3-201ENST00000230085 TSPAN2O60636 221 aa18.14■□□□□ 0.49
SNX3-201ENST00000230085 IFNA6P05013 189 aa18.14■□□□□ 0.49
SNX3-201ENST00000230085 RPL35P42766 123 aaKnown RBP18.14■□□□□ 0.49
SNX3-201ENST00000230085 HMGN3Q15651 99 aa18.14■□□□□ 0.49
SNX3-201ENST00000230085 SGCAQ16586 387 aa18.14■□□□□ 0.49
SNX3-201ENST00000230085 RHOUQ7L0Q8 258 aa18.14■□□□□ 0.49
SNX3-201ENST00000230085 MDGA2Q7Z553 956 aa18.14■□□□□ 0.49
SNX3-201ENST00000230085 C15orf54Q8N8G6 183 aa18.14■□□□□ 0.49
SNX3-201ENST00000230085 OR2Y1Q8NGV0 311 aa18.14■□□□□ 0.49
SNX3-201ENST00000230085 LYPD6BQ8NI32 183 aa18.14■□□□□ 0.49
SNX3-201ENST00000230085 SELENOIQ9C0D9 397 aa18.14■□□□□ 0.49
SNX3-201ENST00000230085 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.14■□□□□ 0.49
SNX3-201ENST00000230085 LANCL2Q9NS86 450 aa18.14■□□□□ 0.49
SNX3-201ENST00000230085 ZMAT5Q9UDW3 170 aaKnown RBP18.14■□□□□ 0.49
SNX3-201ENST00000230085 H3BSH0 61 aa18.13■□□□□ 0.49
SNX3-201ENST00000230085 MFNGO00587 321 aa18.13■□□□□ 0.49
SNX3-201ENST00000230085 CRYBA1P05813 215 aa18.13■□□□□ 0.49
SNX3-201ENST00000230085 UMODP07911 640 aa18.13■□□□□ 0.49
SNX3-201ENST00000230085 CD63P08962 238 aa18.13■□□□□ 0.49
SNX3-201ENST00000230085 VSIG8P0DPA2 414 aa18.13■□□□□ 0.49
SNX3-201ENST00000230085 FPR2P25090 351 aa18.13■□□□□ 0.49
SNX3-201ENST00000230085 NPBWR1P48145 328 aa18.13■□□□□ 0.49
SNX3-201ENST00000230085 KDM8Q8N371 416 aa18.13■□□□□ 0.49
SNX3-201ENST00000230085 VN1R1Q9GZP7 353 aa18.13■□□□□ 0.49
SNX3-201ENST00000230085 SEC61A2Q9H9S3 476 aa18.13■□□□□ 0.49
SNX3-201ENST00000230085 FANCFQ9NPI8 374 aa18.13■□□□□ 0.49
SNX3-201ENST00000230085 NXT1Q9UKK6 140 aaKnown RBP18.13■□□□□ 0.49
SNX3-201ENST00000230085 IGKV3D-11A0A0A0MRZ8 115 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 C5orf51A6NDU8 294 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 COLCA2A8K830 154 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 EEF1E1-BLOC1S5C9J1V9 151 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 FTCDNL1E5RQL4 147 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 ZZEF1O43149 2961 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 SPP1P10451 314 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 AKR1D1P51857 326 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 C1orf140Q5VVS0 124 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 OR10K2Q6IF99 312 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 GRINAQ7Z429 371 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 NAA40Q86UY6 237 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 LHFPL1Q86WI0 220 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 MISPQ8IVT2 679 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 TMED6Q8WW62 240 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 KLHDC3Q9BQ90 382 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 OCSTAMPQ9BR26 566 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 MESP1Q9BRJ9 268 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 CRB3Q9BUF7 120 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 SLC5A7Q9GZV3 580 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 TUBA4BQ9H853 241 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 ZMAT3Q9HA38 289 aaKnown RBP18.12■□□□□ 0.49
SNX3-201ENST00000230085 RHOFQ9HBH0 211 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 FAM206AQ9NX38 181 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 SSUH2Q9Y2M2 353 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 TMED7-TICAM2A0A0A6YYA0 188 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 TMEM269A0A1B0GVZ9 245 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 FAM25EA8MYX2 175 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 C11orf98E9PRG8 122 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 ICOSLGO75144 302 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 CSTBP04080 98 aaKnown RBP18.12■□□□□ 0.49
SNX3-201ENST00000230085 GAPDHP04406 335 aaKnown RBP18.12■□□□□ 0.49
SNX3-201ENST00000230085 VAMP1P23763 118 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 FOLR3P41439 243 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 PDZK1IP1Q13113 114 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 SURF2Q15527 256 aaPredicted RBP18.12■□□□□ 0.49
SNX3-201ENST00000230085 C1QL3Q5VWW1 255 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 GVQW1Q8N7I0 195 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 RXFP4Q8TDU9 374 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 TMEM230Q96A57 120 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 MOB1AQ9H8S9 216 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 PARP11Q9NR21 331 aa18.12■□□□□ 0.49
SNX3-201ENST00000230085 ACACBO00763 2458 aa18.11■□□□□ 0.49
SNX3-201ENST00000230085 TMEM8BA6NDV4 472 aa18.11■□□□□ 0.49
SNX3-201ENST00000230085 FAM157AC9JC47 383 aa18.11■□□□□ 0.49
SNX3-201ENST00000230085 HCRTR2O43614 444 aa18.11■□□□□ 0.49
SNX3-201ENST00000230085 HEXBP07686 556 aa18.11■□□□□ 0.49
SNX3-201ENST00000230085 FCGR3AP08637 254 aa18.11■□□□□ 0.49
SNX3-201ENST00000230085 ZNF823P16415 610 aa18.11■□□□□ 0.49
SNX3-201ENST00000230085 ABCD3P28288 659 aa18.11■□□□□ 0.49
SNX3-201ENST00000230085 SULT1A2P50226 295 aa18.11■□□□□ 0.49
SNX3-201ENST00000230085 SRSF3P84103 164 aaKnown RBP18.11■□□□□ 0.49
SNX3-201ENST00000230085 TLE3Q04726 772 aa18.11■□□□□ 0.49
SNX3-201ENST00000230085 ECH1Q13011 328 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms