RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 OR2AE1Q8NHA4 323 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 PINX1Q96BK5 328 aaKnown RBP12.41□□□□□ -0.42
HCFC2-201ENST00000229330 WDR34Q96EX3 536 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 ASB16Q96NS5 453 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 MBNL1Q9NR56 388 aaKnown RBP12.41□□□□□ -0.42
HCFC2-201ENST00000229330 MPTX1A8MV57 137 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 SHHQ15465 462 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 SLC25A42Q86VD7 318 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 MAP3K3Q99759 626 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 CTDSP1Q9GZU7 261 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 PARP11Q9NR21 331 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 CLCF1Q9UBD9 225 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 EIF1BO60739 113 aaKnown RBP12.4□□□□□ -0.42
HCFC2-201ENST00000229330 EIF3GO75821 320 aaKnown RBP eCLIP12.4□□□□□ -0.42
HCFC2-201ENST00000229330 OR2J2O76002 312 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 YIF1AO95070 293 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 ZIC2O95409 532 aaPredicted RBP12.4□□□□□ -0.42
HCFC2-201ENST00000229330 ANKRD34CP0C6C1 535 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 SLC37A1P57057 533 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 PNRC1Q12796 327 aaPredicted RBP12.4□□□□□ -0.42
HCFC2-201ENST00000229330 RUNX2Q13950 521 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 LIMS2Q7Z4I7 341 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 SNX22Q96L94 193 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 TMED3Q9Y3Q3 217 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 YPEL5P62699 121 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 EEF1A2Q05639 463 aaKnown RBP12.4□□□□□ -0.42
HCFC2-201ENST00000229330 LPAL2Q16609 132 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 LTC4SQ16873 150 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 FAM162BQ5T6X4 162 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 ZNF683Q8IZ20 524 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 SIRT3Q9NTG7 399 aaPredicted RBP12.4□□□□□ -0.42
HCFC2-201ENST00000229330 CDRT15L2A8MXV6 281 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 RPLP1P05386 114 aaKnown RBP12.4□□□□□ -0.42
HCFC2-201ENST00000229330 Q5BKY6 102 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 CA13Q8N1Q1 262 aa12.4□□□□□ -0.42
HCFC2-201ENST00000229330 SDHCQ99643 169 aaPredicted RBP12.4□□□□□ -0.42
HCFC2-201ENST00000229330 ONECUT2O95948 504 aa12.4□□□□□ -0.43
HCFC2-201ENST00000229330 GUSBP08236 651 aa12.4□□□□□ -0.43
HCFC2-201ENST00000229330 PMP22Q01453 160 aa12.4□□□□□ -0.43
HCFC2-201ENST00000229330 IL13RA2Q14627 380 aa12.4□□□□□ -0.43
HCFC2-201ENST00000229330 SLC10A1Q14973 349 aa12.4□□□□□ -0.43
HCFC2-201ENST00000229330 MCTS1Q9ULC4 181 aaKnown RBP12.4□□□□□ -0.43
HCFC2-201ENST00000229330 MYO7AQ13402 2215 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 A0A1W2PNV4 684 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 PLSCR5A0PG75 271 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 C2orf72A6NCS6 295 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 MRPL33O75394 65 aaKnown RBP12.39□□□□□ -0.43
HCFC2-201ENST00000229330 HPP00738 406 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 GCH1P30793 250 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 EIF1P41567 113 aaKnown RBP12.39□□□□□ -0.43
HCFC2-201ENST00000229330 C9orf135Q5VTT2 229 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 LHFPL2Q6ZUX7 228 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 GVQW1Q8N7I0 195 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 C16orf52Q8NHV5 167 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 SIRT7Q9NRC8 400 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 GNG12Q9UBI6 72 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 H3BP45 60 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 GPR37O15354 613 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 BATF2Q8N1L9 274 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 MS4A3Q96HJ5 214 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 SOX7Q9BT81 388 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 OBP2BQ9NPH6 170 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 PRDM7Q9NQW5 492 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 LHX6Q9UPM6 363 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 OR5H15A6NDH6 313 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 OR5H1A6NKK0 313 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 NPIPB8E9PQR5 432 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 TCN2P20062 427 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 LYSMD4Q5XG99 296 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 PARM1Q6UWI2 310 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 LDLRAD3Q86YD5 345 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 FAM181AQ8N9Y4 354 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 IL22RA2Q969J5 263 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 ARHGAP5-AS1Q96IT6 56 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 OLFM2O95897 454 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 PPICP45877 212 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 TCTEX1D1Q8N7M0 179 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 OR5B3Q8NH48 314 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 NOL4LQ96MY1 436 aaPredicted RBP12.39□□□□□ -0.43
HCFC2-201ENST00000229330 CACNA1CQ13936 2221 aa12.39□□□□□ -0.43
HCFC2-201ENST00000229330 PQLC2LA1A4F0 135 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 TRAF3IP2O43734 574 aaPredicted RBP12.38□□□□□ -0.43
HCFC2-201ENST00000229330 HYAL3O43820 417 aaPredicted RBP12.38□□□□□ -0.43
HCFC2-201ENST00000229330 FGF2P09038 288 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 ACAA1P09110 424 aaPredicted RBP12.38□□□□□ -0.43
HCFC2-201ENST00000229330 PMCHP20382 165 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 DLK1P80370 383 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 OR5C1Q8NGR4 320 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 EID2BQ96D98 161 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 ALX4Q9H161 411 aaPredicted RBP12.38□□□□□ -0.43
HCFC2-201ENST00000229330 KCNK15Q9H427 330 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 PPP1R3CQ9UQK1 317 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 URB1O60287 2271 aaKnown RBP12.38□□□□□ -0.43
HCFC2-201ENST00000229330 B4DEV8 164 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 ABHD16AO95870 558 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 VSIG10L2P0DP72 767 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 GABRA2P47869 451 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 UBE2V2Q15819 145 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 PLAC9Q5JTB6 97 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 DCAF12L2Q5VW00 463 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms