RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 OR8S1Q8NH09 359 aa12.13□□□□□ -0.47
SUPT4H1-201ENST00000225504 HPSE2Q8WWQ2 592 aa12.13□□□□□ -0.47
SUPT4H1-201ENST00000225504 OR5P3Q8WZ94 311 aa12.13□□□□□ -0.47
SUPT4H1-201ENST00000225504 MRPL48Q96GC5 212 aaKnown RBP12.13□□□□□ -0.47
SUPT4H1-201ENST00000225504 CAB39Q9Y376 341 aaPredicted RBP12.13□□□□□ -0.47
SUPT4H1-201ENST00000225504 EXOSC1Q9Y3B2 195 aaKnown RBP12.13□□□□□ -0.47
SUPT4H1-201ENST00000225504 MPC1Q9Y5U8 109 aa12.13□□□□□ -0.47
SUPT4H1-201ENST00000225504 CSPG4Q6UVK1 2322 aa12.13□□□□□ -0.47
SUPT4H1-201ENST00000225504 ZNF816-ZNF321PA0A0X1KG74 233 aa12.12□□□□□ -0.47
SUPT4H1-201ENST00000225504 A0A1B0GVI7 797 aa12.12□□□□□ -0.47
SUPT4H1-201ENST00000225504 LOC107986453A0A1B0GWG9 222 aa12.12□□□□□ -0.47
SUPT4H1-201ENST00000225504 CLDN25C9JDP6 229 aa12.12□□□□□ -0.47
SUPT4H1-201ENST00000225504 GBX2P52951 348 aaPredicted RBP12.12□□□□□ -0.47
SUPT4H1-201ENST00000225504 TMEM249Q2WGJ8 235 aa12.12□□□□□ -0.47
SUPT4H1-201ENST00000225504 EGFL6Q8IUX8 553 aa12.12□□□□□ -0.47
SUPT4H1-201ENST00000225504 STX19Q8N4C7 294 aa12.12□□□□□ -0.47
SUPT4H1-201ENST00000225504 SPERTQ8NA61 448 aa12.12□□□□□ -0.47
SUPT4H1-201ENST00000225504 C19orf18Q8NEA5 215 aa12.12□□□□□ -0.47
SUPT4H1-201ENST00000225504 CLDND2Q8NHS1 167 aa12.12□□□□□ -0.47
SUPT4H1-201ENST00000225504 RNF170Q96K19 258 aa12.12□□□□□ -0.47
SUPT4H1-201ENST00000225504 METTL17Q9H7H0 456 aaPredicted RBP12.12□□□□□ -0.47
SUPT4H1-201ENST00000225504 C1orf123Q9NWV4 160 aa12.12□□□□□ -0.47
SUPT4H1-201ENST00000225504 BABAM2Q9NXR7 383 aa12.12□□□□□ -0.47
SUPT4H1-201ENST00000225504 UBAP1Q9NZ09 502 aa12.12□□□□□ -0.47
SUPT4H1-201ENST00000225504 ERVK-18Q9QC07 812 aa12.12□□□□□ -0.47
SUPT4H1-201ENST00000225504 RAB26Q9ULW5 256 aa12.12□□□□□ -0.47
SUPT4H1-201ENST00000225504 NOP16Q9Y3C1 178 aaKnown RBP12.12□□□□□ -0.47
SUPT4H1-201ENST00000225504 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.11□□□□□ -0.47
SUPT4H1-201ENST00000225504 MTRF1O75570 445 aaKnown RBP12.11□□□□□ -0.47
SUPT4H1-201ENST00000225504 ZFPL1O95159 310 aa12.11□□□□□ -0.47
SUPT4H1-201ENST00000225504 ISG15P05161 165 aa12.11□□□□□ -0.47
SUPT4H1-201ENST00000225504 CDK1P06493 297 aa12.11□□□□□ -0.47
SUPT4H1-201ENST00000225504 MYL12AP19105 171 aa12.11□□□□□ -0.47
SUPT4H1-201ENST00000225504 LMO4P61968 165 aa12.11□□□□□ -0.47
SUPT4H1-201ENST00000225504 CSNK2BP67870 215 aa12.11□□□□□ -0.47
SUPT4H1-201ENST00000225504 TMEM42Q69YG0 159 aa12.11□□□□□ -0.47
SUPT4H1-201ENST00000225504 TMPRSS11AQ6ZMR5 421 aa12.11□□□□□ -0.47
SUPT4H1-201ENST00000225504 ZDHHC23Q8IYP9 409 aa12.11□□□□□ -0.47
SUPT4H1-201ENST00000225504 KLHL36Q8N4N3 616 aa12.11□□□□□ -0.47
SUPT4H1-201ENST00000225504 OR1M1Q8NGA1 313 aa12.11□□□□□ -0.47
SUPT4H1-201ENST00000225504 OR51A4Q8NGJ6 313 aa12.11□□□□□ -0.47
SUPT4H1-201ENST00000225504 RAB1CQ92928 201 aa12.11□□□□□ -0.47
SUPT4H1-201ENST00000225504 ZNF184Q99676 751 aaPredicted RBP12.11□□□□□ -0.47
SUPT4H1-201ENST00000225504 PDCD1LG2Q9BQ51 273 aa12.11□□□□□ -0.47
SUPT4H1-201ENST00000225504 GPR173Q9NS66 373 aa12.11□□□□□ -0.47
SUPT4H1-201ENST00000225504 C14orf119Q9NWQ9 140 aa12.11□□□□□ -0.47
SUPT4H1-201ENST00000225504 ENPP5Q9UJA9 477 aa12.11□□□□□ -0.47
SUPT4H1-201ENST00000225504 NPTNQ9Y639 398 aa12.11□□□□□ -0.47
SUPT4H1-201ENST00000225504 TRBV2A0A0J9YWF9 115 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 ANXA2P2A6NMY6 339 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 NRASP01111 189 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 IGHV2-70P01814 119 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 UBCP0CG48 685 aaKnown RBP12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 IGHV4-31P0DP07 118 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 GPM6AP51674 278 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 CHN2P52757 468 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 ZNF154Q13106 437 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 ZMYND11Q15326 602 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 SNCBQ16143 134 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 CEACAM21Q3KPI0 293 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 ZBTB37Q5TC79 503 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 TMEM244Q5VVB8 128 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 CLEC9AQ6UXN8 241 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 BIVMQ86UB2 503 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 FTMTQ8N4E7 242 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 ZNF676Q8N7Q3 588 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 ZFP41Q8N8Y5 198 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 BOLLQ8N9W6 283 aaKnown RBP12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 OR52N1Q8NH53 320 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 Q8TCH9 128 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 RPL3LQ92901 407 aaKnown RBP12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 FGGYQ96C11 551 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 ADAT3Q96EY9 351 aaPredicted RBP12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 MYCBPQ99417 103 aaPredicted RBP12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 MICU1Q9BPX6 476 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 DUSP21Q9H596 190 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 FN3KRPQ9HA64 309 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 CHCHD3Q9NX63 227 aaKnown RBP12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 SCN3BQ9NY72 215 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 ABCA1O95477 2261 aa12.1□□□□□ -0.47
SUPT4H1-201ENST00000225504 A6NLC8 198 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 ZNF732B4DXR9 585 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 OGG1O15527 345 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 CRHBPP24387 322 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 TGM4P49221 684 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 SLC35A2P78381 396 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 SLC3A1Q07837 685 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 UBE2V2Q15819 145 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 ZNF181Q2M3W8 571 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 FAM76BQ5HYJ3 339 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 CLVS2Q5SYC1 327 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 PLCXD3Q63HM9 321 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 KCTD8Q6ZWB6 473 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 LRRC28Q86X40 367 aaPredicted RBP12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 NANOGP1Q8N7R0 232 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 DEFB108BQ8NET1 73 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 OR5AK2Q8NH90 309 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 RGP1Q92546 391 aaPredicted RBP12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 ITFG2Q969R8 447 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 ERGIC1Q969X5 290 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms